Gene Information

Name : ssb (NSE_0759)
Accession : YP_506634.1
Strain : Neorickettsia sennetsu Miyayama
Genome accession: NC_007798
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 676858 - 677313 bp
Length : 456 bp
Strand : +
Note : identified by similarity to SP:P02339; match to protein family HMM PF00436; match to protein family HMM TIGR00621

DNA sequence :
ATGATTAATAAAGTTATTTTGGTCGGCAACCTTGGTAAAGATCCAGAGGTACGTACCATGTCGAATGCAAAGCAGGTGGC
CACTTTTTCATTAGCAACAACGGAAAATTGGAACGACAAAAATACGGGAGAGCGTGTTTCAAAAACTGAGTGGCATCAAG
TGGTTGTATTCAACGAGCCTTTAATCAAGGTGATAAGTAACTACGTAAATAAAGGCACTCGGTTGTATATCGAAGGTTCA
CTCCAAACAAGAAAATGGACTGATAACAATGGCATTGAGAGATACACAACCGAAGTGGTGCTAAACCCATTCAATTCAGT
TTTAAAGATACTCAGCCCGCAGGGGAGCAGTGAAACCCATTATTCCGGAGCTCCGTCCAACAACACAAGAGCTGATTTAG
GAACACCAACGAATCATGTTAATGACACCTTAGATGACGACGATATACCTTTTTGA

Protein sequence :
MINKVILVGNLGKDPEVRTMSNAKQVATFSLATTENWNDKNTGERVSKTEWHQVVVFNEPLIKVISNYVNKGTRLYIEGS
LQTRKWTDNNGIERYTTEVVLNPFNSVLKILSPQGSSETHYSGAPSNNTRADLGTPTNHVNDTLDDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 4e-26 45
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 2e-28 43
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 2e-28 43
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 1e-28 43