|
Name : ctaD (NSE_0622) Accession : YP_506501.1 Strain : Neorickettsia sennetsu Miyayama Genome accession: NC_007798 Putative virulence/resistance : Unknown Product : cytochrome c oxidase subunit I Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : 1.9.3.1 Position : 543552 - 545111 bp Length : 1560 bp Strand : + Note : identified by similarity to SP:Q08855; match to protein family HMM PF00115 DNA sequence : ATGAATAAACATTCAGAGGTCCCTAGCGGCATAAGGCGTTGGCTTTTTTCAACAAATCATAAAGACATAGGCACTTTGTA CATTATTCTTTCTGTAGCTGGGGGAATTGTAGGTGGCCTTTTCTCGTTGATGCTACGTGCACAACTTGCACACCTAGATG TCTTTATGGGCAACTATCAACTCTACAATGTATCTATAACTGCTCATGCGGCGGTTATGGTGTTCTTCATGCTTATGCCA GCACTCATAGCTGGATTTGGAAACTGGTTCGTTCCACTTATGATAGGAGCACCAGACATGTGTTTTCCGAGGCTCAATAA CATCAGCTTTTGGATACTTTTCTTCTCTCTGGTGATTATCGTCATGTCCGCGCTTATTGGCGAAGGACCTGGTACAGGTT GGACGTTCTATCCGCCACTCGCGGGAATTCATTTTCATCCTGATGTATCCATTGATTTAGCAATTTTCGGTTTACATTTG GCTGGTATTTCATCAATTCTCGGGGCCATTAACTTTGTCGCAACTATATTGAACATGCGCGCACCTGGTATGACATTGTT CAAGATGCCACTTTTTGTATGGTCTATTTTTGTGACATCTATACTGGTCCTTATAGTAATGCCGGTTCTGGCTGGCGCTC TTATGATGCTGCTCACCGACCGTAATTTGGGTACAGCTTTTTTTGAAGTCGCAGGTGGTGGTGATCCACTTCTTTTTCAA CACTTGTTCTGGTTCTTTGGTCACCCTGAAGTTTATATTATCATCCTTCCTGCCTTTGGTATTGTTAGTGAAGTTGTGTC TACCTTCTCGCAAAAGCCGGTTTTTGGGTACAAAGGTATGGTTGCTGCAATGGCAATAATCGGCATAATCGGTTGTTTCG TGTGGGCTCACCACATGTTTATTACTGGTATTAACTTCAATGCTCTTGCCTATTTCACCGTTGCAACAATGCTAGTTGGC GTTCCAACAGGCATAAAAGTCTTTAGTTGGATAGCAACAATGTGGGGTGGTTCTATAGATCTTAAAGCACCTATGCTTTT TGCTATAGGCTTCATGTTCTTGTTTGTGGTCGGTGGCGTTACGGGTATTGCACTTTCGAATTCTGCGCTAGATAAGGCTC TACACGACACATACTATGTTGTTGGACACTTTCACTATGTGATGTCGATCGCAGCGCTGTTTGTTGTATACAGCGCTTTC TATTACTGGATTGGTAAAATTTCAGGGAAACAGTACAACGAGTGCTTTGCTAAAATCCATTTTTGGATTACGCTCGTTAG CGTAAATATAACATTCCTACCACAGCACTTTTTAGGTTTAGCAGGTATGCCAAGAAGAATACCCGACTATCCGGATGCCT TCATTCCATGGAACTATGTCTCTTCCTTTGGCGCAGCACTTTCGTTTGGATCGGCGTTATTTTTTGTGTTTATAGTCTTT CATACACTCTGTAAGGGGAAAAAATGTGAAGCTAATCCTTGGGGTGGAAAGACTCTAGAATGGACTTTGTCATCCCCTCC TCCGTTCCATTCGTTTGAAAAGCAACCTGTGGTAGAATAG Protein sequence : MNKHSEVPSGIRRWLFSTNHKDIGTLYIILSVAGGIVGGLFSLMLRAQLAHLDVFMGNYQLYNVSITAHAAVMVFFMLMP ALIAGFGNWFVPLMIGAPDMCFPRLNNISFWILFFSLVIIVMSALIGEGPGTGWTFYPPLAGIHFHPDVSIDLAIFGLHL AGISSILGAINFVATILNMRAPGMTLFKMPLFVWSIFVTSILVLIVMPVLAGALMMLLTDRNLGTAFFEVAGGGDPLLFQ HLFWFFGHPEVYIIILPAFGIVSEVVSTFSQKPVFGYKGMVAAMAIIGIIGCFVWAHHMFITGINFNALAYFTVATMLVG VPTGIKVFSWIATMWGGSIDLKAPMLFAIGFMFLFVVGGVTGIALSNSALDKALHDTYYVVGHFHYVMSIAALFVVYSAF YYWIGKISGKQYNECFAKIHFWITLVSVNITFLPQHFLGLAGMPRRIPDYPDAFIPWNYVSSFGAALSFGSALFFVFIVF HTLCKGKKCEANPWGGKTLEWTLSSPPPFHSFEKQPVVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 5e-82 | 44 |
