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Name : hslU (NSE_0177) Accession : YP_506072.1 Strain : Neorickettsia sennetsu Miyayama Genome accession: NC_007798 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 145864 - 147282 bp Length : 1419 bp Strand : + Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGGGTACAGAGAAAGTCTTTAAGTATTCAGCTGCGGTTGGGCAGGATGCCGAACATATCTTGGAGGATGCTTATTCTGC TGCTCCAAAGGCGCTTGTAAGTTATCTAGACAGATTTGTTGTTGGGCAGAAGTTGGCCAAGAAAAAAATTGCGATTGCAA TAAGAAACCGCTGGAGGAGAAATAATATCCCGAAGCCGCTTCATGATGAAATCATTCCGAAAAATATACTTATGATAGGA CCAACTGGTGTTGGAAAAACGGAAATTGCTAGACGCGTGGCAAAACTCTCAGGGGCACCGTTTATTAAGGTCGAGGCAAC AAAGTTTACCGAGGTCGGCTATGTCGGTCGGGATGTCGAATCGATAATTCGGGATCTTGTTGATAGTGCCGTTGCCCAGG TCAAAGATCAAAAGAGGAAGCAGTTTTCAAAAGAAGCTGAAGAATCTGCCAAGGAGAAAATTCTTGATGCGCTGGTTGGT AAAAAAAATACTGAGGACGACGATCTGGCTGATGGTGAGGATGAAAAACATGATGCAAGAGCTGTTTTTGAGAAAAAGCT CGATGAAGGGAAATTAGATGATGCAGAAATTGAAATAAATGTTCGTGAGCTTCCTCAGAATGTTTTTCCTACGATGGATG TCCCAGGTATGCCAGGTACTCAGATCGGTATGATGAACATCGGGGACATGATGAGTAAGGTCTTTGGTGCCAATAAGAAG TTCAAAAGAAAGAGAGTTAAAGTCAAAGATGCTAGGAAAATCCTTGCGGATGCAGAAGTCGAGGATCTTTTCGATGAAGA CGCAATAATCAAAGAAGCATTAGATCTGGTGACGAACAGGGGTATGGTTTTTATCGATGAGATAGATAAAATCTGTGCTC GAACAGAGGTTAGAGGGGAAGTGAATAGAGAGGGTGTTCAGAGGGATTTGTTACCTCTTTTAGAGGGAACCACGGTAGTG ACAAAATATGGTGTTGTAAAAACGGATCACATACTTTTTGTTGGTTCTGGAGCGTTTCACTTTGCTAAACCGTCAGACTT GCTACCAGAATTACAGGGACGTTTGCCAATAAGGGTAGAACTTGACTCGCTTGATGTAGAAGATATGATCCGTATTCTTA CTGAAACTGAGTCCAGCCTATTGAAGCAGTACTGTGCATTATTGGAGACAGAAGGTGTTTCTCTTGAATTCACAAAAGAT GGTGTGCGTGCAATTGCTGAAGCTGCAATAACGGTCAATAATGAAGTTGAAAATATTGGTGCGAGGCGTCTCCATACAAT AATGGAAACACTACTTGAGGAAATTAACTTCGAGGCCAACGATAATGTGGGGAAGACTTTTTCAATTGACCGTGAATATG TAGATAAACATCTGCAGACTATCATCAAGAAGCTGGATTTGTCGAAGTTTATTCTGTAA Protein sequence : MGTEKVFKYSAAVGQDAEHILEDAYSAAPKALVSYLDRFVVGQKLAKKKIAIAIRNRWRRNNIPKPLHDEIIPKNILMIG PTGVGKTEIARRVAKLSGAPFIKVEATKFTEVGYVGRDVESIIRDLVDSAVAQVKDQKRKQFSKEAEESAKEKILDALVG KKNTEDDDLADGEDEKHDARAVFEKKLDEGKLDDAEIEINVRELPQNVFPTMDVPGMPGTQIGMMNIGDMMSKVFGANKK FKRKRVKVKDARKILADAEVEDLFDEDAIIKEALDLVTNRGMVFIDEIDKICARTEVRGEVNREGVQRDLLPLLEGTTVV TKYGVVKTDHILFVGSGAFHFAKPSDLLPELQGRLPIRVELDSLDVEDMIRILTETESSLLKQYCALLETEGVSLEFTKD GVRAIAEAAITVNNEVENIGARRLHTIMETLLEEINFEANDNVGKTFSIDREYVDKHLQTIIKKLDLSKFIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 2e-73 | 45 |
