|
Name : Mhun_2507 (Mhun_2507) Accession : YP_503926.1 Strain : Methanospirillum hungatei JF-1 Genome accession: NC_007796 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2786429 - 2787706 bp Length : 1278 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTGATATACGATTTGTCCGGGCAAATCCGGATGCCATCAGGGAAGATCTAAAGAAACGAAATGATATGGAGAAGTT AGCATGGATAGATGACCTGCTTGTTCAGGATATCCGTCACCGTGAACTTATTGGTCAGACCAATGAATTACGGCGAAGAC GAAATTCCATCTCATATGACATAAACCGTGCAAAAAAAGCCGGAGAAGATGCATCTGCACTCATCGCTGAAGCTGCAGGG CTCCCTGGACGCATAAAAGAAAATGAAGCTGAGATGGAGGAGATCTCGAAAAAGATACGGTATTACCTCATGCGTATCCC GAATATTCTCCATGAGAGCGTACCGGTTGGTGCTGATGATACCCAGAATGTCGAGGTGAAGAGATATGGCACACCCCGGA CCTTTACCTTTGAACTTAAAAACCACGGGCAACTTGCTGCAGATAATGACTGGGCTGATTTTGAACGTGCTACCAAAACA TCCGGAGCGGGCTTTTATTTTCTGAAAGGAAATCTGGTGCTTCTTGATCTCGCCCTTCAGAGATTTTCCCTTGATATTTT GATGGAAAAAGGGTATACGCCCATCATACCTCCATACATGATTAACCGGAAATCATACGAGGAAGTTACTGATCTTGATG ATTTTGAGAAGGTCATGTATAAAATTGAGGATGATGATGCATACCTGATCGCCACCAGTGAGCATCCGATGGCAGCAATG TACCAGGATGAAATTTTTGAAGAGAAGGATCTACCACTCAGACTTGCAGGACTCTCACCATGTTTCAGACGGGAGATCGG ATCTCATGGTCTGGATACAAAGGGCCTCTTCCGTGTTCATCAGTTTCATAAAGTAGAGCAGTTTGTCTACTGTCATCCGG ATGATTCATGGACGATTCATGAAGAACTTCGTGAAAATGCTGAGGAGATATTCCAGAAACTTGAGATCCCGTACCGGGTT GTAAATATCTGCACTGGTGATATCGGAACGGTTGCAGCAAAGAAATATGATATTGAAGCCTGGATGCCCCGTGAAAACGA ATACCGTGAAGTGGTTTCATGTTCAAACTGCACCACATATCAGGCGGTCAGGTTAAATATCAGAGTCAGGGACAAAGAGG ATTTTGAGTCAAAACAGTTTGTTCATACCCTGAATTCTACTGCTATTGCAACTTCACGGGCCATGCGGGCAATTCTTGAA AATAATCAGCAGGAAGACGGCTCTGTAGTGATTCCAAAGGTACTCAGGCCCTACATGAATGACAAAGAATTTCTATAA Protein sequence : MLDIRFVRANPDAIREDLKKRNDMEKLAWIDDLLVQDIRHRELIGQTNELRRRRNSISYDINRAKKAGEDASALIAEAAG LPGRIKENEAEMEEISKKIRYYLMRIPNILHESVPVGADDTQNVEVKRYGTPRTFTFELKNHGQLAADNDWADFERATKT SGAGFYFLKGNLVLLDLALQRFSLDILMEKGYTPIIPPYMINRKSYEEVTDLDDFEKVMYKIEDDDAYLIATSEHPMAAM YQDEIFEEKDLPLRLAGLSPCFRREIGSHGLDTKGLFRVHQFHKVEQFVYCHPDDSWTIHEELRENAEEIFQKLEIPYRV VNICTGDIGTVAAKKYDIEAWMPRENEYREVVSCSNCTTYQAVRLNIRVRDKEDFESKQFVHTLNSTAIATSRAMRAILE NNQQEDGSVVIPKVLRPYMNDKEFL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-75 | 44 |
