Gene Information

Name : SAOUHSC_02710 (SAOUHSC_02710)
Accession : YP_501172.1
Strain : Staphylococcus aureus NCTC 8325
Genome accession: NC_007795
Putative virulence/resistance : Virulence
Product : leukocidin f subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2491675 - 2492652 bp
Length : 978 bp
Strand : +
Note : leukocidin f subunit precursor

DNA sequence :
ATGAAAATGAATAAATTAGTCAAATCATCCGTTGCTACATCTATGGCATTATTATTACTTTCTGGTACTGCTAATGCTGA
AGGTAAAATAACACCAGTCAGCGTAAAAAAAGTCGATGACAAAGTTACTTTATACAAAACAACAGCCACAGCAGATTCTG
ATAAATTTAAAATTTCACAGATTTTAACATTTAATTTCATCAAAGATAAAAGTTATGATAAAGATACTTTAGTACTTAAA
GCTACTGGGAATATTAACTCAGGCTTTGTGAAACCTAATCCTAATGACTATGACTTTTCAAAATTATATTGGGGAGCTAA
ATACAATGTATCTATAAGCTCACAATCTAATGATTCAGTAAACGTCGTTGATTATGCACCAAAAAATCAAAATGAAGAGT
TTCAAGTTCAAAATACTTTAGGCTATACATTTGGTGGTGACATTAGTATCTCTAATGGTTTATCTGGTGGACTTAATGGA
AATACAGCTTTTTCTGAAACAATTAATTATAAACAAGAAAGTTACAGAACAACATTAAGTCGCAACACAAATTATAAAAA
TGTTGGCTGGGGAGTTGAAGCACATAAAATTATGAATAATGGTTGGGGACCTTATGGAAGAGATAGCTTCCACCCAACAT
ATGGTAATGAACTCTTCTTAGCTGGCAGACAAAGCAGTGCATACGCTGGCCAAAACTTCATAGCGCAACACCAAATGCCA
TTATTATCTAGAAGTAACTTCAATCCAGAATTTTTAAGCGTACTATCACACAGACAAGATGGCGCTAAAAAATCTAAAAT
TACAGTAACTTATCAACGTGAAATGGATTTATACCAAATTCGTTGGAATGGCTTCTACTGGGCAGGCGCAAATTATAAAA
ACTTTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAA
ACTGAAAACAATAAATAG

Protein sequence :
MKMNKLVKSSVATSMALLLLSGTANAEGKITPVSVKKVDDKVTLYKTTATADSDKFKISQILTFNFIKDKSYDKDTLVLK
ATGNINSGFVKPNPNDYDFSKLYWGAKYNVSISSQSNDSVNVVDYAPKNQNEEFQVQNTLGYTFGGDISISNGLSGGLNG
NTAFSETINYKQESYRTTLSRNTNYKNVGWGVEAHKIMNNGWGPYGRDSFHPTYGNELFLAGRQSSAYAGQNFIAQHQMP
LLSRSNFNPEFLSVLSHRQDGAKKSKITVTYQREMDLYQIRWNGFYWAGANYKNFKTRTFKSTYEIDWENHKVKLLDTKE
TENNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lukD NP_374926.1 leukotoxin, LukD Virulence vSa¥â Protein 2e-103 76
lukD YP_186707.1 leukotoxin LukD Virulence vSa¥â Protein 1e-103 76
lukD NP_646584.1 leukotoxin Virulence vSa¥â Protein 1e-103 76
lukD YP_001332752.1 leukocidin LukD precursor Virulence vSa¥â Protein 1e-103 76
lukD YP_494459.1 leukotoxin LukD Virulence vSa¥â Protein 1e-103 76
SAKOR_01767 YP_008491955.1 Leukocidin F subunit lukD Virulence vSa¥â Protein 2e-103 76
lukD NP_372343.2 leukotoxin F-subunit Virulence vSa¥â Protein 2e-103 76
lukF NP_646195.1 Panton-Valentine leukocidin chain F precursor Virulence ¥ÕSa2 Protein 7e-92 73
lukF-PV YP_494078.1 Panton-Valentine leukocidin, LukF-PV Virulence ¥ÕSa2 Protein 7e-92 73
SAOV_1908 YP_005737353.1 Panton-Valentine leukocidin LukF-PV chain precursor Virulence ¥ÕSa3 Protein 1e-90 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAOUHSC_02710 YP_501172.1 leukocidin f subunit VFG1275 Protein 1e-130 100
SAOUHSC_02710 YP_501172.1 leukocidin f subunit VFG1276 Protein 3e-92 73