Gene Information

Name : SAOUHSC_02180 (SAOUHSC_02180)
Accession : YP_500666.1
Strain : Staphylococcus aureus NCTC 8325
Genome accession: NC_007795
Putative virulence/resistance : Unknown
Product : phage minor structural protein
Function : -
COG functional category : :
COG ID : COG5185
EC number : -
Position : 2038746 - 2042531 bp
Length : 3786 bp
Strand : -
Note : phage minor structural protein, N-terminal region domain protein

DNA sequence :
GTGATACATGTTTTAGATTTTAACGACAAGATTATAGATTTCCTTTCTACTGATGACCCTTCCTTAGTTAGAGCGATTCA
TAAACGTAATGTTAATGACAATTCAGAAATGCTTGAACTGCTCATATCATCAGAAAGAGCTGAAAAGTTCCGTGAACGAC
ATCGTGTTATTATAAGGGATTCAAACAAACAATGGCGTGAATTTATTATTAACTGGGTTCAAGATACGATGGACGGCTAC
ACAGAGATAGAATGTATAGCGTCTTATCTTGCTGATATAACAACAGCTAAACCGTATGCACCAGGCAAATTTGAGAAAAA
GACAACTTCAGAAGCATTGAAAGATGTGTTGAGCGATACAGGTTGGGAAGTTTCTGAACAAACCGAATACGATGGCTTAC
GTACTACGTCATGGACTTCTTATCAAACTAGATATGAAGTTTTAAAGCAATTATGTACAACCTATAAAATGGCATTGGAT
TTTTATATAGAGCTTAGTTCTAATACCGTCAAAGGTAGATATGTGGTACTCAAAAAGAAAAACAGCTTATTCAAAGGTAA
AGAAATTGAGTATGGTAAAGATTTGGTTGGGTTAACTAGGAAGATTGATATGTCAGAAATCAAAACAGCATTAATTGCTG
TGGGACCCGAAAATGACAAAGGAAAGCGTTTAGAGTTAGTTGTGACTGATGACGAAGCACAAAGTCAATTCAACTTACCT
ACCCGTTATATTTGGGGAATATACGAACCTCAATCAGATGATCAAAATATGAATGAAACACGGTTGCGTTCTTTAGCCAA
AACAGAGTTAAATAAACGTAAGTCGGCAGTTATGTCATATGAGATTACTTCTACTGATTTGGAAGTTACGTATCCGCACG
AGATTATATCAATTGGTGATACAGTCAGAGTAAAACATAGAGATTTTAACCCGCCATTGTATGTAGAGGCAGAAGTTATT
GCCGAAGAATATAACATAATTTCAGAAAATAGCACATATACATTCGGTCAACCTAAAGAGTTCAAAGAATCAGAATTACG
AGAAGAGTTTAACAAACGATTGAACATAATACATCAAAAGTTAAACGATAATATTAGCAATATCAACACTATAGTTAAAG
ATGTTGTAGATGGTGAATTAGAATACTTTGAACGCAAAATACACAAAAATGATACACCGCCAGAAAATCCAGTCAATGAT
ATGCTTTGGTATGATACAAGTAACCCTGATGTTGCTGTCTTGCGTAGATATTGGAATGGTCGATGGATTGAAGCAACACC
AAATGATGTTGAAAAATTAGGTGGTATAACAAGAGAGAAAGCGCTATTCAGTGAATTAAACAATATTTTTATTAATTTAT
CTATACAACACGCTAGTCTTTTGTCAGAAGCTACAGAATTACTGAATAGCGAGTACTTAGTAGATAATGATTTGAAAGCG
GACTTACAAGCAAGTTTAGACGCTGTGATTGATGTTTATAATCAAATTAAAAATAATTTAGAATCTATGACACCCGAAAC
TGCAACGATTGGTCGGTTGGTAGATACACAAGCTTTATTTCTTGAATATAGAAAGAAATTACAAGATGTCTATACAGATG
TAGAAGATGTCAAAATCGCTATTTCAGATAGATTTAAATTATTACAGTCACAATACACTGATGAAAAATATAAAGAAGCG
TTGGAAATAATAGCAACAAAATTTGGTTTAACGGTGAATGAAGATTTGCAGTTAGTCGGAGAACCTAATGTTGTTAAATC
AGCTATTGAAGCAGCTAGAGAATCCACAAAAGAACAATTACGTGACTATGTAAAAACATCGGACTATAAAACAGACAAAG
ACGGTATTGTTGAACGTTTAGATACTGCTGAAGCTGAGAGAACGACTTTAAAAGGTGAAATCAAAGATAAAGTTACGTTA
AACGAATATCGAAACGGATTGGAAGAACAAAAACAATATACTGATGACCAGTTAAGTGATTTGTCCAATAATCCTGAGAT
TAAAGCAAGTATTGAACAAGCAAATCAAGAAGCGCAAGAAGCTTTAAAATCATACATTGATGCTCAAGATAATCTTAAAG
AGAAGGAATCGCAAGCGTATGCTGATGGTAAAATTTCGGAAGAAGAGCAACGCGCTATACAAGATGCTCAAGCTAAACTT
GAAGAGGCAAAACAAAACGCAGAACTAAAGGCTAGAAACGCTGAAAAGAAAGCTAATGCTTATACAGACAACAAGGTCAA
AGAAAGCACAGATGCACAGAGGAGAACACTGACTCGCTATGGTTCTCAAATTATACAAAATGGTAAGGAAATCAAATTAA
GAACTACTAAAGAAGAGTTTAATGCAACCAATCGTACACTTTCAAATATATTAAACGAGATTGTCCAAAACGTTACAGAT
GGAACAACAATCAGATATGATGATAACGGAGTGGCTCAAGCTTTAAATGTGGGGCCACGTGGTATTAGATTAAATGCTGA
TAAAATTGATATTAACGGTAATAGAGAAATAAACCTTCTTATCCAAAATATGCGAGATAAAGTAGATAAAACCGATATTG
TCAACAGCCTTAATTTATCAAGAGAGGGTCTTGATATCAATGTTAATAGAATTGGAATTAAAGGCGGTAACAATAACAGA
TATGTTCAAATACAGAATGATTCTATTGAACTAGGTGGTATTGTGCAACGAACTTGGAAAGGCAAACGATCAACCGATGA
TATATTCACACGTCTTAAAGATGGACATCTAAGGTTTAGAAATAATACCGCAGGCGGTTCACTTTATATGTCACATTTTG
GTATTTCAACATATATTGATGGAGAAGGCGAAGACGGAGGTTCATCCGGTACTATTCAATGGTGGGATAAAACTTACAGT
GATAGCGGTATGAATGGCATAACAATCAATTCCTATGGTGGTGTCGTTGCACTAACGTCAGATAATAATCGGGTTGTTCT
GGAGTCTTACGCTTCATCGAATATCAAAAGCAAACAGGCACCGGTGTATTTATATCCAAACACAGACAAAGTGCCTGGAT
TAAACCGATTTGCATTCACGCTGTCTAATGCAGATAACGCTTATTCGAGTGATGGTTATATTATGTTTGGTTCTGATGAG
AACTATGATTACGGTGCGGGTATCAGGTTTTCTAAAGAAAGAAATAAAGGTCTTGTTCAAATTGTTAATGGACGATATGC
AACAGGTGGAGATACAACAATCGAAGCAGGGTATGGCAAATTTAATATGCTGAAACGACGTGATGGTAATAGGTATATTC
ATATACAGAGTACAGACCTACTGTCTGTAGGTTCAGATGATGCAGGAGATAGGATAGCTTCTAACTCAATTTATAGACGT
ACTTATTCGGCCGCAGCTAATTTGCATATTACTTCTGCTGGCACAATTGGGCGTTCGACATCAGCGCGTAAATACAAGTT
ATCTATCGAAAATCAATATAACGATAGAGATGAACAACTGGAACATTCAAAAGCTATTCTTAACTTACCTATTAGAACGT
GGTTTGATAAAGCTGAGTCTGAAATTTTAGCTAGAGAGCTGAGAGAAGATAGAAAATTATCGGAAGACACCTATAAACTT
GATAGATACGTAGGTTTGATTGCTGAAGAGGTGGAGAATTTAGGATTAAAAGAGTTTGTCACGTATGATGACAAAGGAGA
AATTGAAGGTATAGCGTATGATCGTCTATGGATTCATCTTATCCCTGTTATCAAAGAACAACAACTAAGAATCAAGAAAT
TGGAGGAGTCAAAGAATGCAGGATAA

Protein sequence :
MIHVLDFNDKIIDFLSTDDPSLVRAIHKRNVNDNSEMLELLISSERAEKFRERHRVIIRDSNKQWREFIINWVQDTMDGY
TEIECIASYLADITTAKPYAPGKFEKKTTSEALKDVLSDTGWEVSEQTEYDGLRTTSWTSYQTRYEVLKQLCTTYKMALD
FYIELSSNTVKGRYVVLKKKNSLFKGKEIEYGKDLVGLTRKIDMSEIKTALIAVGPENDKGKRLELVVTDDEAQSQFNLP
TRYIWGIYEPQSDDQNMNETRLRSLAKTELNKRKSAVMSYEITSTDLEVTYPHEIISIGDTVRVKHRDFNPPLYVEAEVI
AEEYNIISENSTYTFGQPKEFKESELREEFNKRLNIIHQKLNDNISNINTIVKDVVDGELEYFERKIHKNDTPPENPVND
MLWYDTSNPDVAVLRRYWNGRWIEATPNDVEKLGGITREKALFSELNNIFINLSIQHASLLSEATELLNSEYLVDNDLKA
DLQASLDAVIDVYNQIKNNLESMTPETATIGRLVDTQALFLEYRKKLQDVYTDVEDVKIAISDRFKLLQSQYTDEKYKEA
LEIIATKFGLTVNEDLQLVGEPNVVKSAIEAARESTKEQLRDYVKTSDYKTDKDGIVERLDTAEAERTTLKGEIKDKVTL
NEYRNGLEEQKQYTDDQLSDLSNNPEIKASIEQANQEAQEALKSYIDAQDNLKEKESQAYADGKISEEEQRAIQDAQAKL
EEAKQNAELKARNAEKKANAYTDNKVKESTDAQRRTLTRYGSQIIQNGKEIKLRTTKEEFNATNRTLSNILNEIVQNVTD
GTTIRYDDNGVAQALNVGPRGIRLNADKIDINGNREINLLIQNMRDKVDKTDIVNSLNLSREGLDINVNRIGIKGGNNNR
YVQIQNDSIELGGIVQRTWKGKRSTDDIFTRLKDGHLRFRNNTAGGSLYMSHFGISTYIDGEGEDGGSSGTIQWWDKTYS
DSGMNGITINSYGGVVALTSDNNRVVLESYASSNIKSKQAPVYLYPNTDKVPGLNRFAFTLSNADNAYSSDGYIMFGSDE
NYDYGAGIRFSKERNKGLVQIVNGRYATGGDTTIEAGYGKFNMLKRRDGNRYIHIQSTDLLSVGSDDAGDRIASNSIYRR
TYSAAANLHITSAGTIGRSTSARKYKLSIENQYNDRDEQLEHSKAILNLPIRTWFDKAESEILARELREDRKLSEDTYKL
DRYVGLIAEEVENLGLKEFVTYDDKGEIEGIAYDRLWIHLIPVIKEQQLRIKKLEESKNAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAUSA300_1928 YP_494579.1 phi77 ORF002-like protein, phage minor structural protein Not tested ¥ÕSa3 Protein 0.0 99
SAOV_1117 YP_005736612.1 Structural protein, phage associated Not tested ¥ÕSa2 Protein 0.0 99
SAOV_1916c YP_005737361.1 Structural protein, phage associated Not tested ¥ÕSa3 Protein 0.0 99
SAKOR_01930 YP_008492118.1 hypothetical protein Not tested ¥ÕSa3 Protein 0.0 99
SAUSA300_1928 YP_494579.1 phi77 ORF002-like protein, phage minor structural protein Not tested ¥ÕSa3 Protein 0.0 99
SAV1953 NP_372477.1 phi PVL ORF 20 and 21-like protein Not tested ¥ÕSa3 Protein 0.0 95
MW1893 NP_646710.1 hypothetical protein Not tested ¥ÕSa3 Protein 0.0 94
SA1764 NP_375062.1 hypothetical protein Not tested ¥ÕSa3 Protein 0.0 91