|
Name : SAOUHSC_01955 (SAOUHSC_01955) Accession : YP_500454.1 Strain : Staphylococcus aureus NCTC 8325 Genome accession: NC_007795 Putative virulence/resistance : Virulence Product : leukotoxin LukE Function : - COG functional category : - COG ID : - EC number : - Position : 1859995 - 1860900 bp Length : 906 bp Strand : - Note : Pathogenicity island SaPIn3 DNA sequence : TTGTCAGTAGGACTGATTGCACCTTTAGCATCTCCGATTCAAGAATCTAGAGCAAATACTAATATTGAAAATATTGGTGA TGGTGCTGAAGTAATCAAACGTACGGAGGATGTAAGTAGTAAGAAATGGGGCGTTACTCAAAATGTCCAATTCGACTTTG TAAAAGATAAAAAATATAACAAAGACGCTTTAATTGTTAAAATGCAAGGTTTTATTAATTCCAGAACTTCATTTTCAGAT GTGAAGGGTAGTGGATATGAATTAACTAAACGAATGATTTGGCCATTCCAATATAATATAGGACTGACGACTAAAGATCC AAATGTTAGCTTAATCAATTACCTTCCTAAAAACAAAATAGAAACTACTGATGTTGGTCAAACATTAGGATATAACATTG GAGGTAATTTCCAGTCAGCACCATCTATAGGTGGCAATGGCTCATTTAATTATTCTAAAACAATTAGTTATACCCAAAAG AGTTATGTCAGTGAAGTAGACAAGCAAAACTCAAAATCTGTTAAATGGGGTGTTAAAGCAAACGAATTTGTTACGCCTGA TGGAAAAAAATCTGCGCATGATAGATATTTATTCGTACAAAGTCCAAATGGTCCAACAGGTTCAGCAAGAGAATATTTTG CTCCTGATAATCAATTGCCACCTTTAGTTCAAAGTGGCTTTAATCCATCGTTTATCACTACACTATCACATGAAAAAGGT TCAAGTGATACGAGTGAATTTGAAATTTCATATGGTAGAAACTTAGATATTACATATGCGACTTTATTCCCTAGAACTGG TATTTACGCAGAAAGAAAGCATAATGCATTTGTAAATAGAAACTTTGTAGTTAGATATGAAGTTAATTGGAAAACACACG AAATTAAAGTGAAAGGACATAATTAA Protein sequence : MSVGLIAPLASPIQESRANTNIENIGDGAEVIKRTEDVSSKKWGVTQNVQFDFVKDKKYNKDALIVKMQGFINSRTSFSD VKGSGYELTKRMIWPFQYNIGLTTKDPNVSLINYLPKNKIETTDVGQTLGYNIGGNFQSAPSIGGNGSFNYSKTISYTQK SYVSEVDKQNSKSVKWGVKANEFVTPDGKKSAHDRYLFVQSPNGPTGSAREYFAPDNQLPPLVQSGFNPSFITTLSHEKG SSDTSEFEISYGRNLDITYATLFPRTGIYAERKHNAFVNRNFVVRYEVNWKTHEIKVKGHN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lukE | YP_001332753.1 | leukocidin LukE precursor | Virulence | vSa¥â | Protein | 4e-137 | 99 |
| lukE | YP_494460.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 4e-137 | 99 |
| lukE | YP_186708.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 4e-137 | 99 |
| lukE | NP_646585.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 4e-137 | 99 |
| lukE | NP_372344.1 | leukotoxin S-subunit | Virulence | vSa¥â | Protein | 4e-137 | 99 |
| lukE | NP_374927.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 4e-137 | 99 |
| SAKOR_01768 | YP_008491956.1 | Leukocidin S subunit lukE | Virulence | vSa¥â | Protein | 3e-137 | 99 |
| SAOV_1909 | YP_005737354.1 | leukocidin chain lukM precursor | Virulence | ¥ÕSa3 | Protein | 3e-105 | 74 |
| lukS | NP_646196.1 | Panton-Valentine leukocidin chain S precursor | Virulence | ¥ÕSa2 | Protein | 4e-97 | 69 |
| lukS-PV | YP_494079.1 | Panton-Valentine leukocidin, LukS-PV | Virulence | ¥ÕSa2 | Protein | 4e-97 | 69 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SAOUHSC_01955 | YP_500454.1 | leukotoxin LukE | VFG1273 | Protein | 7e-103 | 71 |
| SAOUHSC_01955 | YP_500454.1 | leukotoxin LukE | VFG1277 | Protein | 2e-97 | 69 |
| SAOUHSC_01955 | YP_500454.1 | leukotoxin LukE | VFG1274 | Protein | 5e-88 | 68 |
