Gene Information

Name : Saro_0720 (Saro_0720)
Accession : YP_496001.1
Strain : Novosphingobium aromaticivorans DSM 12444
Genome accession: NC_007794
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 759902 - 760549 bp
Length : 648 bp
Strand : -
Note : -

DNA sequence : 
ATGATCACCTGCCAGATGATCCACAAGACGTACGCCGCCGGGCACGGAGAACGCAAGGTCCTGCGCGGGCTCGATTTCGC
CATCTCGAGAGGCGAGCATGTGGGCTTTCTCGGTCGCAACGGCGCGGGCAAGACGACGCTGATCAAACTGCTTGGCGGCG
TGGAGTTTCCGACGGCGGGCACGATCCGGCGGCGCATGACGGTGTCGTGGCCCCTCGGCTTTGGCGGCGGCTTTCAGGGC
AGCCTGACCGGCTACGATAACGCGCGCTTCATCGCCCGCATCTATGGCATGTCCTACCGCGACATCGCCGACTTCGTCGA
GGACTTCACCGAACTTGGCCGCCAGTTGCGGGCCCCGGTCAAGACCTACTCGCAAGGCATGCGCGCGCGTCTTGCCTTCG
CCCTTTCCATGGCGATCGAGTTCGACTGCTATCTTGTCGACGAAGTTATTCTCGTGGGGGACCACCGTTTCCACGAGAAA
TGCAGGCTCGAGTTGTTCGGCAAGCGGTCCGACCGAGCACTGATCCTTGCCTCGCACAACGCCGCCCTGATCCGCGAGCA
TTGCACGCGCGCCATGGTCCTGCACGATGGGCGGGGTACGATGCACGACGACATAGACCTTGCCCTTCGTCACTACGAGG
CGCTGTAA

Protein sequence : 
MITCQMIHKTYAAGHGERKVLRGLDFAISRGEHVGFLGRNGAGKTTLIKLLGGVEFPTAGTIRRRMTVSWPLGFGGGFQG
SLTGYDNARFIARIYGMSYRDIADFVEDFTELGRQLRAPVKTYSQGMRARLAFALSMAIEFDCYLVDEVILVGDHRFHEK
CRLELFGKRSDRALILASHNAALIREHCTRAMVLHDGRGTMHDDIDLALRHYEAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 5e-52 54
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 4e-38 45
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 3e-37 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Saro_0720 YP_496001.1 ABC transporter-like protein VFG2563 Protein 5e-51 60
Saro_0720 YP_496001.1 ABC transporter-like protein VFG0258 Protein 2e-52 54
Saro_0720 YP_496001.1 ABC transporter-like protein VFG0696 Protein 2e-50 53
Saro_0720 YP_496001.1 ABC transporter-like protein VFG1449 Protein 9e-38 42