Gene Information

Name : Saro_2869 (Saro_2869)
Accession : YP_498139.1
Strain : Novosphingobium aromaticivorans DSM 12444
Genome accession: NC_007794
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.99.3
Position : 3090707 - 3092221 bp
Length : 1515 bp
Strand : -
Note : -

DNA sequence :
ATGAACGACATGACCACCATCTCGCGCACGCAGCGCGAATACTCGGAGGCCGCCAAGGCCTTCCTCGCGCGCAAGCCGCA
GTTGTTCATCAACAACGAGTGGGTCGACAGCAGCCACGACGCCGTGATCGAGGTGGAAGACCCCTCGAACGGCAGGATCG
TCGGTCATGTCGTCGATGCCTCGGACAAGGACGTCGACCGGGCGGTTGCCGCGGCGCGCGCCGCGTTCGACGATGGCCGC
TGGTCCAACCTGCCGCCAATGGTCCGCGATCGCACCATGAATCGCCTGGCCGACCTGCTTGAAGCCAACGCCGATCTCTT
TGCCGAGCTCGAAGCGATCGACAACGGCAAGCCCAAGGGCATGGCCGGCGCCGTCGACATCCCCGGCGCGATCAGCCAGC
TCCGCTTCATGGCCGGCTGGGCCAGCAAGGTCGCGGGCGAGACGACGCAGCCCTACACGATGCCCAACGGCACCGTGTTC
AGCTACACCGTCAAGGAACCCGTCGGCGTCTGCGCGCAGATCGTGCCGTGGAACTTCCCGCTGCTGATGGCCTCGCTCAA
GATCGCCCCGGCGCTGGCGGCTGGCTGCACCCTGGTGCTGAAGCCCGCCGAACAGACCTCGCTTACCGCGCTCAAGCTTG
CCGATCTCGTGGTCGAGGCCGGCTTCCCTGCGGGCGTGATCAACATCATCACCGGCAACGGCCACACCGCCGGTGACCGC
ATGGTCAAGCATCCCGACGTCGACAAGGTCGCCTTCACCGGCTCGACCGAGATCGGCAAGCTGATCAATCGCAACGCCAC
CACCACGCTCAAGCGGGTCACGCTCGAACTGGGCGGGAAGAGCCCCGTCGTGGTCATGCCCGACGTCGACGTGGCGCAGA
CCGCGCCTGGCGTTGCCGGCGCGATCTTCTTCAACGCGGGCCAGGTCTGCGTTGCCGGTTCGCGTCTCTATGCGCACCGT
TCGGTGTTCGATTCCGTGCTCGAAGGCATGACCCAGACCGCGCCGTTCTGGGCGCCGCGCCCCTCGCTGGATCCCGAAGC
CCACATGGGCCCGTTGGTCAGCAAGGAGCAGCACGACCGCGTGATGGGCTACATCGAGGCGGGCAAGCGCGATGGCGCCA
GCGTCGTCATGGGCGGCGATTGCCCCAGCGCCGATGGCGGGTACTACGTCAACCCGACGATCCTTGCAGACGTGAACCCG
CAGATGTCGGTCGTGCGCGAGGAAATCTTCGGCCCCGTCGTCGTCGCCCAGCGCTTCGACGATCTCGATGAAGTGGCGAA
GATGGCCAACGACACCTGCTTCGGCCTCGGCGCGGGCGTGTGGACGCGCGATGTCGCGGTGATGCACAAGCTTGCCTCGA
AGATCAAATCGGGCACCGTGTGGGGCAACTGCCACGCCCTGATCGATACCGCGCTGCCCTTTGGCGGCTACAAGGAATCG
GGCCTGGGCCGCGAACAGGGGCGCGCCGGCATCGACGCCTACCTCGAGACCAAGACCGTCATCATCCAGATGTAA

Protein sequence :
MNDMTTISRTQREYSEAAKAFLARKPQLFINNEWVDSSHDAVIEVEDPSNGRIVGHVVDASDKDVDRAVAAARAAFDDGR
WSNLPPMVRDRTMNRLADLLEANADLFAELEAIDNGKPKGMAGAVDIPGAISQLRFMAGWASKVAGETTQPYTMPNGTVF
SYTVKEPVGVCAQIVPWNFPLLMASLKIAPALAAGCTLVLKPAEQTSLTALKLADLVVEAGFPAGVINIITGNGHTAGDR
MVKHPDVDKVAFTGSTEIGKLINRNATTTLKRVTLELGGKSPVVVMPDVDVAQTAPGVAGAIFFNAGQVCVAGSRLYAHR
SVFDSVLEGMTQTAPFWAPRPSLDPEAHMGPLVSKEQHDRVMGYIEAGKRDGASVVMGGDCPSADGGYYVNPTILADVNP
QMSVVREEIFGPVVVAQRFDDLDEVAKMANDTCFGLGAGVWTRDVAVMHKLASKIKSGTVWGNCHALIDTALPFGGYKES
GLGREQGRAGIDAYLETKTVIIQM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-76 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-77 42
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-77 42
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-77 42
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 4e-74 42
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-76 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Saro_2869 YP_498139.1 aldehyde dehydrogenase VFG0082 Protein 5e-77 42