Gene Information

Name : Saro_2824 (Saro_2824)
Accession : YP_498094.1
Strain : Novosphingobium aromaticivorans DSM 12444
Genome accession: NC_007794
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 3048765 - 3051344 bp
Length : 2580 bp
Strand : -
Note : -

DNA sequence :
ATGAACCTCGAGAAATTCACCGACCGCGCCAAGGGCTTCCTGCAGGCCGCGCAGACCGTTGCGATCCGCATGAACCACCA
GCGGATCACGCCCGACCACATCCTCAAGGCCCTGCTGGAAGACAGCGAGGGCATGGCCAGTGGCCTGATCCAGCGCGCGG
GCGGCAATGCCGCCCTGGCGCAGACCGAAGTCGACAAGGCGCTGGCGAAGATCCCGGCGGTGTCCGGTTCGGGTGCCCAG
GCGACGCCGGGGCTCGACAACGATGCCGTGCGCGTGCTCGATTCCGCCGAGCAGATCGCGGCCAAGTCCAACGACAGCTT
CGTCACCGTCGAGCGCATGCTCGTCGCGCTGACGCTCGCCACCACGACGTCGGCGGGGCAGGCGCTCAAGGCCGCGAACG
TGACCGCGCAGGCGCTGGAAGCGGCGATCACGCAGCTTCGCGGCGGTCGCACGGCGGACAGCGCGAGCGCGGAAAACGCC
TATGACGCGATGAAGAAGTACGCGCGCGACCTGACCGAGGCGGCGCGCGAGGGCAAGCTCGACCCGGTGATCGGCCGTGA
CGAGGAGATCCGCCGCACCGTGCAGATCCTCGCCCGGCGCACCAAGAACAACCCGGCGCTGATCGGCGAGCCGGGCGTTG
GCAAGACCGCGATCGCCGAAGGCCTCGCGCTGCGCATCGCCAATGGCGACGTGCCGGATTCGCTGAAGGACCGCCGCCTC
ATGGCGCTCGACATGGGTTCGCTCATTGCCGGTGCGAAGTATCGCGGCGAGTTCGAGGAGCGCCTGAAGGCCGTGCTCGA
CGAGGTGAAGGGCGCGGAAGGCGAGATCATCCTGTTCATCGACGAGATGCACACCCTGATCGGGGCGGGCAAGAGCGAGG
GCGCGATGGACGCGGGCAACCTGCTCAAGCCAGCCCTGGCGCGCGGCGAACTGCACTGCATCGGCGCGACGACGCTGGAC
GAGTACCAGAAGTACGTCGAGAAGGACCCCGCGCTGCAGCGGCGGTTCCAGCCGGTATTCGTGGGCGAGCCGACCGTCGA
GGACACGATCAGCATCCTGCGCGGCATCAAGGACAAGTACGAGCTGCACCACGGCGTACGCATTGCCGACAATGCGATCG
TGGCTGCGGCGACGCTTTCGAACCGCTACATCTCCGACCGCTTCCTGCCCGACAAGGCCATCGACCTGATGGACGAGGCG
GCGAGCCGCATCCGCATGGAAGTGGAAAGCAAGCCCGAGGAAATCGAGAAGCTCGACCGGCGCATCATCCAGATGAAGAT
CGAGGAGATGGCGCTTGCGAAGGAGACCGACCAGGCGTCGAAGGACCGGCTGGCGACCCTGCGCGAGGAACTGGCGAACC
AGGAGCAGCAATCGGCCGAGCTGACCACCCGCTGGCAGAACGAGCGCGACAAGATCGCCGCCGAGGGCAAGGTCAAGGAA
GCGCTGGATGCGGCGCGCAGCGAGCTGGAGGTGGCGCAGCGCAACGGCGACCTGGCGAAGGCCGGCGAGCTTGCCTATGG
CCGCATTCCCGAGCTTGAGCGGCAACTGGCCGAAGCGCAGGGCGTGAGCCAGAACGCGATGCTGCGCGAGGAAGTGACCG
CCGAGGACATCGCCGCCGTCGTCAGCAAGTGGACCGGCGTGCCCGTCGACCGGATGATGGAAGGCGAGCGCGAGAAGCTG
CTGCACATGGAAGAGGCGCTGGGCAAGCGCGTGATTGGTCAGAAGGATGCGGTGCTGGCCGTGTCCAAGGCCGTCCGCCG
GGCCCGCGCGGGGCTTCAGGACCCGAACCGTCCGCTGGGCAGCTTCCTGTTCCTGGGCCCCACGGGCGTGGGCAAGACCG
AGCTGACCAAGGCGCTGGCGGGCTTCCTGTTCGACGACGACAACGCGATGGTGCGCATCGACATGTCCGAGTTCATGGAA
AAGCACTCCGTCAGCCGGCTGATCGGCGCGCCTCCGGGCTATGTCGGTTACGATGAAGGCGGCGTTCTGACCGAAGCAAT
CCGCAGGCGGCCCTACCAGGTCGTGCTGTTCGACGAGGTCGAGAAGGCGCACTCGGACGTGTTCAATGTGCTGTTGCAGG
TGCTCGACGACGGGCGCCTGACCGATGGGCAGGGCCGCGTGGTGGACTTCACCAACACGCTGATCATCCTGACCAGCAAC
CTCGGCAGCCAGTACCTCGCCAATCTGGAGGAGGGGCAGGACGTGCAGAGCGTCGAGCCGCAAGTCATGGACGTCGTGCG
CGCTCATTTCCGGCCCGAGTTCCTCAACCGTCTGGACGAGATCATCCTGTTCCACCGGCTGGGCCACGAACACATGGCGC
CGATCGTCGACATCCAGGTGGGCCGCGTGGCGAACCTGCTCAAGGATCGCAAGATCGTGCTCGACCTCACCGACGCGGCC
AAGCGCTGGCTGGGACGGGTCGGCTACGACCCGGTCTATGGCGCTCGTCCGTTGAAGCGGGCCGTGCAGCGGTACTTGCA
GGACCCGCTGGCCGAAAAGCTGCTGGGCGGCGAAGTGCCCGATGGCAGCACGGTGCGGATCGACGAGGGCGATGGGGCCC
TGAGCTTCGTGATCGCATGA

Protein sequence :
MNLEKFTDRAKGFLQAAQTVAIRMNHQRITPDHILKALLEDSEGMASGLIQRAGGNAALAQTEVDKALAKIPAVSGSGAQ
ATPGLDNDAVRVLDSAEQIAAKSNDSFVTVERMLVALTLATTTSAGQALKAANVTAQALEAAITQLRGGRTADSASAENA
YDAMKKYARDLTEAAREGKLDPVIGRDEEIRRTVQILARRTKNNPALIGEPGVGKTAIAEGLALRIANGDVPDSLKDRRL
MALDMGSLIAGAKYRGEFEERLKAVLDEVKGAEGEIILFIDEMHTLIGAGKSEGAMDAGNLLKPALARGELHCIGATTLD
EYQKYVEKDPALQRRFQPVFVGEPTVEDTISILRGIKDKYELHHGVRIADNAIVAAATLSNRYISDRFLPDKAIDLMDEA
ASRIRMEVESKPEEIEKLDRRIIQMKIEEMALAKETDQASKDRLATLREELANQEQQSAELTTRWQNERDKIAAEGKVKE
ALDAARSELEVAQRNGDLAKAGELAYGRIPELERQLAEAQGVSQNAMLREEVTAEDIAAVVSKWTGVPVDRMMEGEREKL
LHMEEALGKRVIGQKDAVLAVSKAVRRARAGLQDPNRPLGSFLFLGPTGVGKTELTKALAGFLFDDDNAMVRIDMSEFME
KHSVSRLIGAPPGYVGYDEGGVLTEAIRRRPYQVVLFDEVEKAHSDVFNVLLQVLDDGRLTDGQGRVVDFTNTLIILTSN
LGSQYLANLEEGQDVQSVEPQVMDVVRAHFRPEFLNRLDEIILFHRLGHEHMAPIVDIQVGRVANLLKDRKIVLDLTDAA
KRWLGRVGYDPVYGARPLKRAVQRYLQDPLAEKLLGGEVPDGSTVRIDEGDGALSFVIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 1e-113 43
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 9e-114 43
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-107 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Saro_2824 YP_498094.1 ATPase AAA VFG2076 Protein 4e-124 46
Saro_2824 YP_498094.1 ATPase AAA VFG2084 Protein 9e-119 43