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Name : Saro_2652 (Saro_2652) Accession : YP_497922.1 Strain : Novosphingobium aromaticivorans DSM 12444 Genome accession: NC_007794 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2887977 - 2889494 bp Length : 1518 bp Strand : - Note : - DNA sequence : GTGGAGGCGGGCGAAGACATCGAGGGCATGACCGTTGCGGTCGCGCAGGCCGGGCCTGCGATGCCCTATGCCTTCGCGCG CGACCGCGGCGTCCTCGTGGAAAGCCTGAACGACACCGAGGTTACGGTGGCCCTGCGCGAGGGCGGCGATCCGCTCGCGT TGCTCGAAATCAGGCGCGTACACAAACGACACCTAAACGTACACGAAGTGACCACAACCGAGTTCGAGAAGCTCCTCGCC ACGGCCTATGCGGTCGACGGGGCGGCGGCTGCGGTGGCCGGCGACATGGGCATCGCGGGCGACGCGCTCGACCCTCTCGC GCTCGGCCTGCCGACCGCAGAGGACCTCCTCGACAGCGCCGATGACGCGCCCGCGATCCGCCTGATCAATGGCCTGATCG CCGAGAGCTTGCGCCAGGGCGTGTCGGACATCCACATCGAACCTTACGAAACCGCGCTTGTCGTGAGGATGCGGGTCGAT GGCGTGCTGACCGAGAAGCTGCGCATGCCGCCGCATGTCGCGCCGGTGCTGGTGAGCCGCATCAAGGTCATGGCGCGGCT CGACATTGCCGAACGGCGCGTGCCGCAGGACGGCCGTATCTCGTTGAGCCTGGGCGGAAAACTGGTCGACGTGCGCGTCT CGACCCTGCCCAACCGCGCCGGCGAGCGAGTGGTCATGCGCCTGCTCGACAAGGAAAATGCCGGACTGGACCTCGTCCAT CTCGGCCTCGACCCCAAGTCGGAAGACGTCCTGAGCCGGGCCCTGGCGGAGCCAAACGGCATCGTGCTGGTGACCGGCCC GACGGGTTCGGGCAAGACGACGACGCTCTATGCGGCGTTGCGCGGCCTCAACGATGGCGCGCGGAATATCCTTACTGTTG AAGACCCTGTGGAATACGCTGTGGATGGCGTCGGCCAGACGCAGGTCAACGCCAAAGTCGGGCTGACCTTCGCGGCGGGA TTGCGCGCGATCCTCCGCCAGGACCCGGACGTGGTCATGGTCGGCGAAATCCGCGACCGGGAAACCGCTGAAATCGCGGT GCAGGCGTCGCTGACCGGCCACCTCGTGCTGTCGACCGTGCATACCAACGACGCGGCCGGCGCGGTCACGCGCATGCGCG ACATGGGGGTGGAGCCGTTCCTGCTGGCATCGACCCTGCGCGCGGTGATCGCACAGCGGCTGGTGCGCCGGCTCTGCCCG CATTGCCGCGAGGAGCGTGTCCTCGACGCGGGAATGGCCGAAGTCCTCGGTCTTGAGGCGGGCAGCAAGGTCCGTGCCGC ACGCGGCTGCGCAGAGTGCGGCCAGACCGGATACCAGGGCCGTATCGGCGTGTTCGAGGCGCTGCGGGTGGACGATGCGA TCCGCCAGATGATCCACGACAATGCCGACGAGGCGGCCATCGCGCGCCATGCCTTCGCCGATGCGCCGACCCTTGCGGGA TCCGTGCGCCGCCTTGTCGCCGAAGGAGCGACGAGCCCCGAGGAAGCGGCACGCATCATGCGGCGGGACGGGGCCTGA Protein sequence : MEAGEDIEGMTVAVAQAGPAMPYAFARDRGVLVESLNDTEVTVALREGGDPLALLEIRRVHKRHLNVHEVTTTEFEKLLA TAYAVDGAAAAVAGDMGIAGDALDPLALGLPTAEDLLDSADDAPAIRLINGLIAESLRQGVSDIHIEPYETALVVRMRVD GVLTEKLRMPPHVAPVLVSRIKVMARLDIAERRVPQDGRISLSLGGKLVDVRVSTLPNRAGERVVMRLLDKENAGLDLVH LGLDPKSEDVLSRALAEPNGIVLVTGPTGSGKTTTLYAALRGLNDGARNILTVEDPVEYAVDGVGQTQVNAKVGLTFAAG LRAILRQDPDVVMVGEIRDRETAEIAVQASLTGHLVLSTVHTNDAAGAVTRMRDMGVEPFLLASTLRAVIAQRLVRRLCP HCREERVLDAGMAEVLGLEAGSKVRAARGCAECGQTGYQGRIGVFEALRVDDAIRQMIHDNADEAAIARHAFADAPTLAG SVRRLVAEGATSPEEAARIMRRDGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-105 | 51 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-105 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Saro_2652 | YP_497922.1 | type II secretion system protein E | VFG0182 | Protein | 8e-113 | 54 |
| Saro_2652 | YP_497922.1 | type II secretion system protein E | VFG2048 | Protein | 3e-107 | 51 |
| Saro_2652 | YP_497922.1 | type II secretion system protein E | VFG2426 | Protein | 1e-79 | 51 |
| Saro_2652 | YP_497922.1 | type II secretion system protein E | VFG1876 | Protein | 1e-108 | 49 |
