Name : Saro_1979 (Saro_1979) Accession : YP_497253.1 Strain : Novosphingobium aromaticivorans DSM 12444 Genome accession: NC_007794 Putative virulence/resistance : Resistance Product : DEAD/DEAH box helicase-like protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 2096600 - 2098657 bp Length : 2058 bp Strand : - Note : - DNA sequence : ATGCGTCCCGACCTGCTCAATCCACTGTTTGCCGAGGCCAGCAGCCTGAAGGGCGTTGGGCCTGGCCTCGCACGTCCTCT GGAAAAGCTCGGCCTGACGCGGGTAAAGGATTTTGCCTACCACCTTCCCGATCGTTTCGTCCTGCGCCGCGCCATAGCGA ATCTCGACGAGGCGAGCGTTGGCGAGCAGATCGTCGTTGCGCTCACACCTCGTGACTATCGTCAGTCCGCAGGCCGGGGG CCGTTTCGCGTGATGGCTGAGGACGAAAGCGGCAGCTTCGTTGCACTGACCTATTTTGGCCGCGCTTCCTACACGGCCAA GAAGCAGCTTCCGCTGGGCGAAAAACGATGGGTCGCCGGACGCCTCGATCAGTTCGGCCAGACCTGGCAAATCGTCCATC CCGACCATGTGAGCGACGACAGCGCAGGGATGCTCGGCCAGTTGAACGAGCCTGTCTATCCGTTGTCCGAGGGGTTGACC CAGGGGCGGTTGCAGGGGCTGGTGCACCAGTCGCTCGCACACTTGCCGCAGCTTCCAGAATGGATCGAGCCCGGTCTCGC TCAGCGTATGGACTGGCCGGCATGGCATGAGGCGCTGCCCTTGGCGCACAAGGGCGAGCACAAGGCCGCGCGCGATCGGC TCGCTTACGATGAATTGCTGGCCAACAGCCTTGCGCTCATCCTCGTGCGGGAAAGCAACCGCAGCCGGCAGGGCACTCCG CTGCACGGAGATGGTCATCTCCGTGCGAAGCTGAACCTCCCGTTCGACCTTACCGGTGCCCAGAAGCGCTCCATCGCCGA GATCGAGGGCGACGTGGCGCAAGGCGCGCCCATGTTGCGCCTTCTCCAGGGCGACGTGGGGTCGGGCAAGACCGCCGTGG CGCTCAACGCCATGCTGATCGCGGTGGAATCGGGCGCGCAGGCGGCCCTGCTTGCACCAACCGAGATCCTGGCGCGCCAA CACGCCGATACGCTGTCGAAGATGGCAGTGGGCACGGGGGTCAACATCGCTCTGCTGACCGGGCGGGACAAGGGCAGGGC GCGCGAGTCCATTCTCATGGGCCTGCTCGACGGTAGCATCGACATCTGCGTGGGTACGCACGCGATCTTTCAGGAGGCAG TTGCCTATCGCAATCTGGCGCTGGTGGTGATCGACGAACAGCATCGCTTCGGCGTGGGCCAGCGGCTGATGCTGACGCAG AAGGCGCGGCGCACGCCCCATTGCCTTGCGATGACCGCCACGCCCATTCCGCGCACGCTGACGCTTGCGCAATATGGTGA AATGGATGTCTCTCGCCTCGACGAGATGCCGCCCGGCCGACAGGCCATCGACACGAGAGTTGTCGCGCAGGAGCGGCTCG CCGATGTGATAGAGGGGGTGGGCCGACACATCGCGAAGGGTGCCCAGGCGTACTGGGTCTGCCCCATGGTCCGCGAGCAG GAGAACGACGATATGGCCGCAGCCGAGGCGCGCTTCGCAGCCTTGAAGGAGCGGTTCGGCGATATGGTCGTGATGGTGCA CGGGCAGCTCCGGCCCGAGGTCAAGGATGCGGCGATGGAACGCTTCGCGCGCGGCGATGCGAAGCTGCTGGTGGCCACCA CCGTAATCGAGGTTGGCGTCGACGTTCCGAATGCTACCTTGATGGTGATCGAGCAGGCGGAGCGTTTTGGCCTTGCCCAG TTGCACCAGCTACGCGGCAGGGTCGGACGTGGCAGTCAGCAATCGACCTGTCTTCTTCTCCGGGGCGATGCGCTGTCCGA GACCGGGCGCGAGAGGCTCGCCTTGATGAGGGAGACGCAGGACGGCTTTCGGCTTGCCGAAGAGGACTTGCGGCTGCGTG GCGGCGGCGAACTTCTGGGGACGCGCCAGTCCGGCGAGACGCCGTTCAAGGTCGCGGATTTCGAACAGATCGCGAAGCTT CTACCGCTGGCGCACGACGATGCCCGGCTCCTGATGGAGCGCGACGGCGGGCTTTCGTCCCCCCGCGGGCAGGCGGCGCG CGTGTTGTTGTATCTGTTCGAACGCGACTGGGGCGTCCAGTTACTGCGCGGCGGTTAG Protein sequence : MRPDLLNPLFAEASSLKGVGPGLARPLEKLGLTRVKDFAYHLPDRFVLRRAIANLDEASVGEQIVVALTPRDYRQSAGRG PFRVMAEDESGSFVALTYFGRASYTAKKQLPLGEKRWVAGRLDQFGQTWQIVHPDHVSDDSAGMLGQLNEPVYPLSEGLT QGRLQGLVHQSLAHLPQLPEWIEPGLAQRMDWPAWHEALPLAHKGEHKAARDRLAYDELLANSLALILVRESNRSRQGTP LHGDGHLRAKLNLPFDLTGAQKRSIAEIEGDVAQGAPMLRLLQGDVGSGKTAVALNAMLIAVESGAQAALLAPTEILARQ HADTLSKMAVGTGVNIALLTGRDKGRARESILMGLLDGSIDICVGTHAIFQEAVAYRNLALVVIDEQHRFGVGQRLMLTQ KARRTPHCLAMTATPIPRTLTLAQYGEMDVSRLDEMPPGRQAIDTRVVAQERLADVIEGVGRHIAKGAQAYWVCPMVREQ ENDDMAAAEARFAALKERFGDMVVMVHGQLRPEVKDAAMERFARGDAKLLVATTVIEVGVDVPNATLMVIEQAERFGLAQ LHQLRGRVGRGSQQSTCLLLRGDALSETGRERLALMRETQDGFRLAEEDLRLRGGGELLGTRQSGETPFKVADFEQIAKL LPLAHDDARLLMERDGGLSSPRGQAARVLLYLFERDWGVQLLRGG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 1e-132 | 50 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Saro_1979 | YP_497253.1 | DEAD/DEAH box helicase-like protein | BAC0356 | Protein | 2e-95 | 45 |