Gene Information

Name : Saro_1458 (Saro_1458)
Accession : YP_496735.1
Strain : Novosphingobium aromaticivorans DSM 12444
Genome accession: NC_007794
Putative virulence/resistance : Unknown
Product : IstB-like ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 1501401 - 1502258 bp
Length : 858 bp
Strand : +
Note : -

DNA sequence :
ATGAACGGCATCGCACCAGCCACGCGCATCGACTCCATCCGCCGGAGCCTGGTCAGCCTCAAGATGCCCCGGGCGCTCGA
GATCCTCGATGCGACCCTGCGGCGTATCGAGCAGGGCCAGATCGATGGCATCGAGGCACTCGACGAACTGCTGGGCGAAG
AGTTGTCGCTGCGTGAAAACCGGCGGATCAAGGCGGCCCTGCGCATGGCCCGGCTGCCCGTCGTGAAAACGCTCGCCGGC
TACGACTTCTCGTTCCAGCCTTCGCTCGACAGGAACCGTATCCTCGCTCTTGCCGGGCTCGACTTCATTGAACGCGCCGA
GGTCGTCCATCTGCTGGGGCCGCCTGGCACCGGCAAAAGCCACATTGCCACCGCGCTCGCGGTTGAGGCCGTGCGCGCCG
GGAAAGCGGTCTACTTCATCCCGCTCGCCGATCTGATCGCCCAGCTCGCCAAGGCCGAACGTGAAGGCACGCTCAGGGAG
AAGATCCGGTTCCTGACCAGGGCATCGCTGCTCGTCGTCGATGAAATCGGATACCTGCCGGTCACACCGGGCGGCGCCAA
CCTGTTCTTCCAGCTGGTCAACGCCCGCTACGAAAAGGGCGCCATGATCCTCACCTCCAACCGCGGCTTCGCCGAATGGG
GTGAGGTCTTCGGCGATCCTGTCGTCGCCACGGCGCTGCTCGACAGGCTGCTGCACCATGCCGTCGTCATCCAGGTCGAA
GGCTCCAGCTACCGAATGCGTGAGCACGCCGCGCTTGTGCCCGAAAACGTGCGCAACGGTGCCACGTTCCATCCGCCGCA
GCCCAAACGCCGTGGCCGACCACCGACGAAAGGAAAATCCGATCACGAATATGGCTGA

Protein sequence :
MNGIAPATRIDSIRRSLVSLKMPRALEILDATLRRIEQGQIDGIEALDELLGEELSLRENRRIKAALRMARLPVVKTLAG
YDFSFQPSLDRNRILALAGLDFIERAEVVHLLGPPGTGKSHIATALAVEAVRAGKAVYFIPLADLIAQLAKAEREGTLRE
KIRFLTRASLLVVDEIGYLPVTPGGANLFFQLVNARYEKGAMILTSNRGFAEWGEVFGDPVVATALLDRLLHHAVVIQVE
GSSYRMREHAALVPENVRNGATFHPPQPKRRGRPPTKGKSDHEYG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 2e-44 47
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 2e-44 43
unnamed CAA21402.1 - Not tested HPI Protein 2e-44 43
api84 CAF28558.1 putative transposase Not tested YAPI Protein 2e-44 43
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-44 43
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 2e-44 43
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 2e-44 43
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 2e-44 43
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 2e-44 43
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 2e-44 43
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 2e-44 43
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 2e-44 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Saro_1458 YP_496735.1 IstB-like ATP-binding protein VFG1627 Protein 9e-45 43
Saro_1458 YP_496735.1 IstB-like ATP-binding protein VFG1606 Protein 9e-45 43
Saro_1458 YP_496735.1 IstB-like ATP-binding protein VFG1663 Protein 1e-44 43
Saro_1458 YP_496735.1 IstB-like ATP-binding protein VFG1515 Protein 9e-45 43