Gene Information

Name : Saro_1108 (Saro_1108)
Accession : YP_496387.1
Strain : Novosphingobium aromaticivorans DSM 12444
Genome accession: NC_007794
Putative virulence/resistance : Virulence
Product : L-glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 1155575 - 1156984 bp
Length : 1410 bp
Strand : -
Note : -

DNA sequence :
ATGGCAACTGCAAAGGACATCCTCGCCCGCATCAAGGACGAGGAAATCGAATGGGTCGATCTCCGTTTCACCGACCCGAA
GGGCAAGTGGCAGCACCTGACCATGGTGTCGACCGTCCTCGGCGAGGATGAACTCGAGGACGGCCTCATGTTCGACGGTT
CGTCGATCGAAGGCTGGAAGGCCATCAACGAGTCGGACATGATCCTCAAGCCCGACCTCGACGCGGTCTACGTCGATCCG
TTCTCGGCCAGCCCGATGCTGATCATCTGCTGCGACATCGTCGAGCCTTCGACCGGCGAACTCTACGCCCGCGACCCGCG
CTCGACCGCGAAGCGCGCCGAAGCCTTCGTCAAGACGGCCGGCCTTGGCGACACCGTCTACGTCGGCCCGGAAGCAGAGT
TCTTCCTCTTCGACGACGTCAAGTTCTACGACGGCTATGACGGCAACGGTTTCCGCATCGACGACATCGAGCTGCCGACC
AACTCGAACAAGGACATCGAAGGCGGCAACCTCGCCCACCGTCCGCGCGCCAAGGGCGGCTACTTCCCCGTCGCGCCGGT
CGACAGCTGCGTCGACATCCGCGGCGAGATGGTCCGCACCATGCTCGACATGGGCCTGCCCTGCGACAAGCACCACCACG
AAGTGGCCTCGGCCCAGCACGAGCTCGGCCTGACCTTCGGCACGCTCGTCCAGACCGCCGACCGCATGCAGGTCTACAAG
TACGTCGTGCAGCAGGTCGCCCATGCCTATGGCAAGACCGCCACGTTCATGCCGAAGCCGATCAAGGGCGACAACGGCTC
GGGCATGCACACCCACATCTCGATCTGGGATAGCGGCAAGCCCCTGTTCGCCGGTAATGGCTATGCCGGCCTGTCGGACA
TGTGCCTGTACTTCATCGGCGGCGTGATCAAGCACGCCAAGGCGCTGAACGCCTTCACCAACCCGACCACCAACAGCTAC
AAGCGCCTGGTGCCGGGCTACGAAGCCCCCGTTCTGCTGGCCTACTCGGCCCGCAACCGTTCGGCTTCGTGCCGCATCCC
CTATGGCGCTGGCGCCAAGGCAAAGCGCGTGGAATTCCGTTTCCCCGACGCGATGGCCAACCCCTACCTGTGCTACGCTG
CGCTGCTCATGGCCGGCATCGACGGGATCAAGAACAAGATCCATCCGGGCGAAGCCATGGACAAGAACCTCTACGACCTG
CCGCCGGCAGAGCTCGCCGAAGTTCCGACCGTGTGCGGATCGCTCCGTGAAGCGCTGGAAAGCCTCGAAGCCGACCACGA
CTTCCTGCTGCAGGGCGGCGTGTTCACCAAGGAACAGATCGAAAGCTACATCGAACTGAAGTGGCCGGAAGTGCTGCGTT
GGGAAACCACGCCGTCGGCCGTCGAGTTCGACATGTACTACTCGCTCTGA

Protein sequence :
MATAKDILARIKDEEIEWVDLRFTDPKGKWQHLTMVSTVLGEDELEDGLMFDGSSIEGWKAINESDMILKPDLDAVYVDP
FSASPMLIICCDIVEPSTGELYARDPRSTAKRAEAFVKTAGLGDTVYVGPEAEFFLFDDVKFYDGYDGNGFRIDDIELPT
NSNKDIEGGNLAHRPRAKGGYFPVAPVDSCVDIRGEMVRTMLDMGLPCDKHHHEVASAQHELGLTFGTLVQTADRMQVYK
YVVQQVAHAYGKTATFMPKPIKGDNGSGMHTHISIWDSGKPLFAGNGYAGLSDMCLYFIGGVIKHAKALNAFTNPTTNSY
KRLVPGYEAPVLLAYSARNRSASCRIPYGAGAKAKRVEFRFPDAMANPYLCYAALLMAGIDGIKNKIHPGEAMDKNLYDL
PPAELAEVPTVCGSLREALESLEADHDFLLQGGVFTKEQIESYIELKWPEVLRWETTPSAVEFDMYYSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 8e-108 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Saro_1108 YP_496387.1 L-glutamine synthetase VFG1399 Protein 2e-100 49