|
Name : SAUSA300_0809 (SAUSA300_0809) Accession : YP_493509.1 Strain : Staphylococcus aureus FPR3757 Genome accession: NC_007793 Putative virulence/resistance : Unknown Product : putative DNA primase Function : - COG functional category : R : General function prediction only COG ID : COG3378 EC number : - Position : 887405 - 889777 bp Length : 2373 bp Strand : + Note : Staphylococcus aureus pathogenicity island; identified by match to protein family HMM PF03288; match to protein family HMM TIGR01613 DNA sequence : GTGGCAATTAAGAAAAAAGATAGAATTATTGGAGTTAAAGAATTAGAAATACCGCAAGAATTAAAATTAGTGCCCAATTG GGTATTATGGCGAGCTGAATGGAACGAGAAGCAACAAAATTTTGGAAAAGTACCATATAGTATTAATGGTTACAGAGCTA GTACAACCAATAAAAAAACATGGTGTGACTTTGAAAGTGTAAGTATTGAATATGAAGTTGATGAGCAATATAGCGGTATA GGTTTTGTATTAAGTGATGGTAATAATTTTGTTTGCCTAGATATTGATAATGCAATTGATAAAAAAGGACAAATCAATTC TGAATTAGCACTAAAAATGATGCAACTCACATATTGTGAAAAGTCTCCAAGTGGTACAGGATTACATTGTTTCTTTAAAG GTAAACTACCAGATAACCGTAAAAAGAAAAGAACAGATTTAGACATAGAGTTATATGATTCAGCAAGGTTTATGACTGTT ACAGGATGCACAATTGGTCAAAGTGATATTTGTGATAATCAAGAAGTATTAAATACTCTAGTTGATGAATATTTTAAAGA GAATTTGCCAGCAAATGAGGTTGTGAGAGAGGAATCTAATACCAATATACAATTATCTGATGAAGATATTATAAACATTA TGATGAAATCTAAACAAAAAGATAAAATTAAAGATCTATTACAAGGCACATATGAATCATATTTTGAGAGTTCAAGCGAA GCAGTACAAAGCTTATTACACTACTTAGCGTTTTACACAGGTAAAAACAAACAGCAAATGGAGCGTATATTTTTAAACTA CAATAATCTTACGGATAAATGGGAAAGTAAACGAGGTAATACGACTTGGGGACAGCTTGAGTTAGATAAAGCTATAAAGA ATCAAAAGACAATTTATACTAAATCGATAGATGAATTTAATGTTATACCACAGGGGAGTAAAGATGTTAAACAGTTGTTG AATCAATTGGGGCATGAAGAAAGAACAAAAATGGAAGAAAATTGGATTGAAGAAGGAAAACGAGGGCGAAAGCCTACAAC AATTAGCCCTATAAAATGTGCATATATTTTGAATGAGCATTTAACATTTATACTTTTTGATGATGAAGAAAATACTAAGT TAGCTATGTATCAATTTGATGAAGGGATATATACACAGAACACTACAATTATAAAACGAGTGATTTCCTATTTAGAGCCC AAACATAATAGCAACAAAGCTGATGAAGTTATTTATCATTTAACCAATATGGTAGATATAAAAGAGAAAACTAACTCACC ATACTTAATACCAGTTAAAAATGGTGTATTTAACCGTAAAACGAAGCAACTAGAATCATTTACACCTGATTATATATTTA CCAGTAAAATAGATACATCGTATGTAAGGCAAGATATAGTACCTGAAATAAATGGCTGGAATATAGATCGGTGGATAGAA GAGATTGCTTGTAATGATAATCAGGTTGTTAAATTATTGTGGCAAGTAATTAATGACTCAATGAATGGTAACTACACTCG TAAAAAGGCTATTTTCTTTGTTGGTGATGGAAATAATGGTAAAGGGACGTTTCAAGAATTATTGTCTAATGTAATAGGTT ATAGCAATATTGCTAGCTTAAAAGTGAATGAGTTTGATGAACGTTTTAAATTGAGTGTGTTAGAGGGCAAGACAGCAGTA ATTGGAGACGATGTACCAGTTGGTGTGTATGTCGATGATTCTTCAAACTTTAAAAGTGTAGTTACTGGCGATCCAGTGTT GGTTGAGTTTAAAAATAAACCCTTATATAGAGCGACTTTTAAGTGTACAGTTATTCAATCAACGAATGGAATGCCTAAAT TTAAAGACAAAACAGGCGGGACTTTAAGAAGGTTATTGATAGTACCGTTTAATGCCAATTTTAATGGCATTAAAGAGAAT TTTAAAATCAAAGAAGACTATATAAAAAATCAGCAAGTGCTAGAGTATGTGCTTTATAAAGCAATTAATTTAGATTTTGA AACCTTTGACATTCCTGATGCATCTAAAAAAATGCTTGAAGTATTTAAAGAAGATAACGATCCAGTTTATGGGTTTAAAG TAAATATGTTTGATCAATGGACTATTAGAAAAGTGCCGAAATATATTGTATACGCATTTTATAAAGAATATTGTGATGAA AATGGCTATAATGCATTGAGTTCAAACAAGTTTTATAAACAATTTGAACATTATTTAGAGAATTATTGGAAAACTGATGC ACAGCGAAGATATGACAATGAAGAACTTGCTAAGAGGATATACAACTTTAATGACAATAGAAATTACATTGAACCTATTG AAAGTGGAAAAAACTATAAATCGTATGAAAAGGTGAAGCTAAAAGCAATATAG Protein sequence : MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNFGKVPYSINGYRASTTNKKTWCDFESVSIEYEVDEQYSGI GFVLSDGNNFVCLDIDNAIDKKGQINSELALKMMQLTYCEKSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTV TGCTIGQSDICDNQEVLNTLVDEYFKENLPANEVVREESNTNIQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSE AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYTKSIDEFNVIPQGSKDVKQLL NQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEHLTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEP KHNSNKADEVIYHLTNMVDIKEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTSKIDTSYVRQDIVPEINGWNIDRWIE EIACNDNQVVKLLWQVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELLSNVIGYSNIASLKVNEFDERFKLSVLEGKTAV IGDDVPVGVYVDDSSNFKSVVTGDPVLVEFKNKPLYRATFKCTVIQSTNGMPKFKDKTGGTLRRLLIVPFNANFNGIKEN FKIKEDYIKNQQVLEYVLYKAINLDFETFDIPDASKKMLEVFKEDNDPVYGFKVNMFDQWTIRKVPKYIVYAFYKEYCDE NGYNALSSNKFYKQFEHYLENYWKTDAQRRYDNEELAKRIYNFNDNRNYIEPIESGKNYKSYEKVKLKAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAUSA300_0809 | YP_493509.1 | putative DNA primase | Not tested | SaPI5 | Protein | 0.0 | 100 |
| SAOV_2058c | YP_005737501.1 | Putative DNA primase | Not tested | SaPI2 | Protein | 0.0 | 99 |
| MW0751 | NP_645568.1 | putative primase | Not tested | vSa3 | Protein | 0.0 | 98 |
| SAPIG0476 | YP_005733286.1 | putative primase | Not tested | SAPI-S0385 | Protein | 0.0 | 83 |
| SAOV_0421 | YP_005735937.1 | putative DNA primase | Not tested | SaPI1 | Protein | 0.0 | 83 |
