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Name : int (SAUSA300_0799) Accession : YP_493499.1 Strain : Staphylococcus aureus FPR3757 Genome accession: NC_007793 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 881996 - 883216 bp Length : 1221 bp Strand : - Note : Staphylococcus aureus pathogenicity island; identified by match to protein family HMM PF00589 DNA sequence : ATGTGGTTAGAAAAATTTAAAAATAAGAATAAAGAAACTAAATATAGATATTACGAGAAGTACAAAGACCCTCTCACTGC CAAATGGAGACGTGTTAGCGTGGTACTTAATAAGAATGGTAAGCAATCACAAAAAGAAGCTCAAAGACTCTTAAATGAGC GTATAGAAGAAAAACTGAATGATAAGAAACCTACTACACTTAAGTCACTAACTTTCCATGTCGCATGTGATGAGTGGTTT CAGAATTATATCAAAACGTCTGGGTCAAAAAGAACAACTATTAAAACTAAATTGAGTAAGCTAAACACTTTGAAGAAATT TGTAGATGAAGATATTTTAATCAATAAAATAACACTTTCATATGCGCAACAAGTTTTCGATGAAATGGATAGTAAAGGTT ATGTATATCAAGTAAACAAAGATGCGTTAAGCATATTCAAAAATGTATTTGAATACACTAGACGTATCTATAAACTGCAA GATTTAGAATTTTTAAAAGATATAACATTAAATAAAAGAATTAAGTCTTATGATGAAGTGAAAGCTAAACGTAATAAGTA CCTCGAATTAAATGAAATAGAATCTATCATCAAAGATATTAATACGAAGGCTCAGAAGATGCACTCAGGTATCCATAAGC GGTTTTATTTATTCGTTGCACTCATGACAGAATTCCAAGCCTTAAATGGTATGCGTATTGGTGAAATGTTAGCCATTCAA AATGAAGATATAGACTTTGATAATAAGAGTTTAAATATTAACGGAACAATCCATTGGTTTCACGATGAATCTGGTGGATT CGGTGTAAAAGATACCACTAAAACAGAGTCTAGTTATAGAACAATTGGATTGAGTAGCAGAAGTTGCGAGATATTAAAGA AAGCAATACTGGAGAACAAAAAGGATTCAAAATGGAATGATGGATATCTAAATAGAAATTTTGTATTTACTAATCATAAA GGCAACCCAATGCAGACTGAAAGATTCAATAAAATCCTTAGGGAAGCAGCTAAAGATGTTGGTATTGATAAAGAAGTTTC TTCACATATATTAAGACATAGCCACATATCATTACTCTCTCAACAAGGCGTGTCACTTAAAGCTATTATGGATCGTGTAG GCCATTCCGACCACCGTACAACACTTTCCATTTATTCTCACGTTACTGAACAGATGGATAAGGATATGATGAACAAACTT GAACAGGTAAAACTTGGATAA Protein sequence : MWLEKFKNKNKETKYRYYEKYKDPLTAKWRRVSVVLNKNGKQSQKEAQRLLNERIEEKLNDKKPTTLKSLTFHVACDEWF QNYIKTSGSKRTTIKTKLSKLNTLKKFVDEDILINKITLSYAQQVFDEMDSKGYVYQVNKDALSIFKNVFEYTRRIYKLQ DLEFLKDITLNKRIKSYDEVKAKRNKYLELNEIESIIKDINTKAQKMHSGIHKRFYLFVALMTEFQALNGMRIGEMLAIQ NEDIDFDNKSLNINGTIHWFHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKAILENKKDSKWNDGYLNRNFVFTNHK GNPMQTERFNKILREAAKDVGIDKEVSSHILRHSHISLLSQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKL EQVKLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | YP_493499.1 | integrase | Not tested | SaPI5 | Protein | 1e-161 | 100 |
| SACOL0885 | YP_185756.1 | pathogenicity island protein, integrase | Not tested | vSa1 | Protein | 1e-160 | 99 |
| int | AAL04148.1 | integrase-like protein | Not tested | SaPI3 | Protein | 9e-161 | 99 |
| int | AAC28969.1 | integrase | Not tested | SaPI1 | Protein | 4e-158 | 98 |
| SAAV_0787 | YP_003281710.1 | pathogenicity island protein, integrase | Virulence | SaPIAv | Protein | 8e-157 | 96 |
| SAOV_0274 | YP_005735791.1 | putative prophage integrase | Not tested | ¥ÕSa1 | Protein | 3e-62 | 48 |
| SAUSA300_1438 | YP_494135.1 | phiSLT ORF401-like protein, integrase | Not tested | ¥ÕSa2 | Protein | 1e-61 | 47 |
| int | NP_646259.1 | integrase | Not tested | ¥ÕSa2 | Protein | 2e-61 | 47 |
| SAR0366 | YP_039823.1 | integrase | Not tested | SaPI4 | Protein | 3e-69 | 47 |
