|
Name : treC (SAUSA300_0449) Accession : YP_493161.1 Strain : Staphylococcus aureus FPR3757 Genome accession: NC_007793 Putative virulence/resistance : Unknown Product : alpha,alpha-phosphotrehalase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.93 Position : 505705 - 507345 bp Length : 1641 bp Strand : + Note : identified by match to protein family HMM PF00128; match to protein family HMM TIGR02403 DNA sequence : GTGTCGAAAGAAATAGATTGGAGAAAATCCGTTGTATATCAAATTTATCCTAAGTCGTTTAATGATACGACGGGGAATGG TATAGGAGATATCAATGGAATTATAGAAAAATTGGATTATATCAAGTTATTGGGTGTTGATTATATTTGGTTAACACCAG TGTATGAATCACCGATGAATGATAATGGCTATGATATCAGCAATTATTTAGAAATCAATGAAGACTTTGGAACGATGGAT GATTTTGAAAAGTTAATCAAAGTTGCGCATCAAAAAGACTTGAAAGTGATGTTAGATATTGTCATTAATCATACGTCGAC GGAGCATGAATGGTTTAAAGAAGCCCGTAAATCTAAAGATAACCCTTATAGAGATTATTACTTTTTCAGATCATCTGAAG ACGGGCCGCCAACAAATTGGTATTCTAAATTCGGTGGTAATGCATGGAAGTATGATTCTGAGACAGATGAATATTATTTA CATTTATTTGATGTCAGTCAAGCTGATTTAAATTGGGATAATCCGGAAGTACGTCAATCGTTATATCGCATAGTCAATCA TTGGATAGACTTCGGCGTTGATGGTTTTCGATTTGATGTCATTAACTTAATTTCTAAAGGTGAATTTAAGGACTCTGACA AAATAGGTAAAGAATTTTATACGGATGGTCCTAGAGTGCATGAGTTTCTGCATGAATTAAATCGTCAAACGTTTGGTAAC ACTGACATGATGACTATAGGAGAAATGTCTTCGACGACGATTGAAAATTGTATTAAGTATACACAACCAGAACGCCAAGA ATTGAATAGTGTTTTTAATTTTCATCATCTAAAGGTTGATTATGTTGATGGTGAAAAGTGGACAAATGCGAAGCTTGATT TTCATAAGTTAAAGGAAATTCTGATGCAATGGCAACGAGGTATTTATGACGGTGGCGGATGGAACGCGATTTTCTGGTGT AATCATGATCAGCCACGGGTAGTGTCTAGATTTGGTGATGATACGTCGGAAGAGATGAGGATACAAAGTGCTAAAATGTT AGCTATCGCACTGCATATGTTGCAAGGGACGCCATATATTTACCAAGGTGAAGAAATTGGTATGACGGACCCACATTTTA CATCAATAGCACAATATCGTGATGTTGAATCGATTAATGCCTACCATCAGTTGTTAAGTGAAGGGCATGCTGAAGCGGAT GTGTTAGCGATTTTAGGACAGAAGTCACGAGACAATTCGAGAACGCCTATGCAATGGAGTGATGATGTTAATGCTGGATT TACAGCTGGTAAGCCTTGGATTGATATTTCGGAAAATTATCATCAGGTCAACGTTAGACAAGCACTTCAGAATAAAGAGT CTATTTTCTATACGTATCAAAAATTAATACAATTAAGACATACGCATGATATTATTACGTATGGAGACATTGTGCCACGT TTTATGGATCATGATCATTTATTTGTTTATGAACGTCATTATAAGAATCAACAATGGCTAGTAATTGCGAATTTCTCAGC ATCGGCTGTTGATTTGCCAGAAGGATTGGCTAGAGAAGGTTGTGTTGTGATTCAAACAGGCACAGTGGAAAATAATACGA TAAGCGGGTTTGGTGCAATTGTAATCGAAACAAACGCGTAA Protein sequence : MSKEIDWRKSVVYQIYPKSFNDTTGNGIGDINGIIEKLDYIKLLGVDYIWLTPVYESPMNDNGYDISNYLEINEDFGTMD DFEKLIKVAHQKDLKVMLDIVINHTSTEHEWFKEARKSKDNPYRDYYFFRSSEDGPPTNWYSKFGGNAWKYDSETDEYYL HLFDVSQADLNWDNPEVRQSLYRIVNHWIDFGVDGFRFDVINLISKGEFKDSDKIGKEFYTDGPRVHEFLHELNRQTFGN TDMMTIGEMSSTTIENCIKYTQPERQELNSVFNFHHLKVDYVDGEKWTNAKLDFHKLKEILMQWQRGIYDGGGWNAIFWC NHDQPRVVSRFGDDTSEEMRIQSAKMLAIALHMLQGTPYIYQGEEIGMTDPHFTSIAQYRDVESINAYHQLLSEGHAEAD VLAILGQKSRDNSRTPMQWSDDVNAGFTAGKPWIDISENYHQVNVRQALQNKESIFYTYQKLIQLRHTHDIITYGDIVPR FMDHDHLFVYERHYKNQQWLVIANFSASAVDLPEGLAREGCVVIQTGTVENNTISGFGAIVIETNA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 6e-119 | 49 |
