|
Name : lukD (SAUSA300_1768) Accession : YP_494459.1 Strain : Staphylococcus aureus FPR3757 Genome accession: NC_007793 Putative virulence/resistance : Virulence Product : leukotoxin LukD Function : - COG functional category : - COG ID : - EC number : - Position : 1955319 - 1956302 bp Length : 984 bp Strand : - Note : identified by match to protein family HMM PF07968; match to protein family HMM TIGR01002 DNA sequence : ATGAAAATGAAAAAATTAGTCAAATCATCAGTTGCTTCATCAATTGCACTGCTTTTGCTATCGAATACAGTTGATGCAGC TCAACATATCACACCTGTAAGCGAGAAAAAAGTAGATGACAAAATCACTTTATACAAAACAACAGCAACATCTGATAATG ATAAATTGAATATTTCTCAAATTTTAACGTTTAATTTCATTAAGGATAAAAGTTATGACAAAGATACGTTAGTACTTAAG GCAGCCGGAAACATTAATTCAGGTTATAAAAAGCCTAATCCAAAAGATTACAATTACTCACAGTTTTATTGGGGCGGTAA GTATAATGTTTCGGTTAGTTCAGAATCAAATGATGCTGTAAATGTTGTTGACTATGCACCTAAAAATCAAAATGAAGAAT TCCAAGTTCAACAAACATTAGGTTATTCTTATGGCGGAGATATTAATATATCTAATGGCTTATCAGGTGGATTAAATGGA TCAAAATCATTTTCAGAAACGATAAATTATAAACAAGAAAGTTACAGAACTACGATTGATAGAAAAACAAATCATAAATC AATTGGCTGGGGTGTTGAGGCGCACAAAATTATGAATAATGGTTGGGGACCATATGGTAGAGATAGTTATGACCCAACAT ATGGTAATGAACTGTTTTTAGGCGGTAGACAAAGTAGTTCAAATGCTGGTCAAAATTTCTTGCCAACACATCAAATGCCT TTATTGGCGCGTGGTAACTTTAACCCAGAATTTATAAGCGTACTTTCTCATAAACAAAATGATACAAAAAAATCTAAAAT CAAAGTAACTTACCAAAGAGAAATGGATAGATATACTAATCAATGGAATCGACTACACTGGGTTGGTAATAACTACAAAA ATCAAAATACAGTAACGTTTACATCTACTTATGAAGTTGACTGGCAAAACCATACTGTTAAATTAATCGGTACGGATTCT AAAGAAACTAATCCTGGAGTATAA Protein sequence : MKMKKLVKSSVASSIALLLLSNTVDAAQHITPVSEKKVDDKITLYKTTATSDNDKLNISQILTFNFIKDKSYDKDTLVLK AAGNINSGYKKPNPKDYNYSQFYWGGKYNVSVSSESNDAVNVVDYAPKNQNEEFQVQQTLGYSYGGDINISNGLSGGLNG SKSFSETINYKQESYRTTIDRKTNHKSIGWGVEAHKIMNNGWGPYGRDSYDPTYGNELFLGGRQSSSNAGQNFLPTHQMP LLARGNFNPEFISVLSHKQNDTKKSKIKVTYQREMDRYTNQWNRLHWVGNNYKNQNTVTFTSTYEVDWQNHTVKLIGTDS KETNPGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lukD | YP_494459.1 | leukotoxin LukD | Virulence | vSa¥â | Protein | 8e-131 | 100 |
| lukD | YP_186707.1 | leukotoxin LukD | Virulence | vSa¥â | Protein | 8e-131 | 100 |
| lukD | NP_646584.1 | leukotoxin | Virulence | vSa¥â | Protein | 8e-131 | 100 |
| lukD | YP_001332752.1 | leukocidin LukD precursor | Virulence | vSa¥â | Protein | 8e-131 | 100 |
| SAKOR_01767 | YP_008491955.1 | Leukocidin F subunit lukD | Virulence | vSa¥â | Protein | 1e-130 | 99 |
| lukD | NP_372343.2 | leukotoxin F-subunit | Virulence | vSa¥â | Protein | 1e-130 | 99 |
| lukD | NP_374926.1 | leukotoxin, LukD | Virulence | vSa¥â | Protein | 1e-130 | 99 |
| SAOV_1908 | YP_005737353.1 | Panton-Valentine leukocidin LukF-PV chain precursor | Virulence | ¥ÕSa3 | Protein | 4e-109 | 85 |
| lukF-PV | YP_494078.1 | Panton-Valentine leukocidin, LukF-PV | Virulence | ¥ÕSa2 | Protein | 3e-106 | 83 |
| lukF | NP_646195.1 | Panton-Valentine leukocidin chain F precursor | Virulence | ¥ÕSa2 | Protein | 3e-106 | 83 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lukD | YP_494459.1 | leukotoxin LukD | VFG1276 | Protein | 1e-106 | 83 |
| lukD | YP_494459.1 | leukotoxin LukD | VFG1275 | Protein | 1e-102 | 76 |
