|
Name : SAUSA300_1643 (SAUSA300_1643) Accession : - Strain : Staphylococcus aureus FPR3757 Genome accession: NC_007793 Putative virulence/resistance : Unknown Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 1802471 - 1804122 bp Length : 1652 bp Strand : - Note : transposase, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error DNA sequence : ATGTATAAAATTTATAACATGACCCAACTTACACTACCAATAGAAACCTCTGTTAGAATTCCTCAAAATGATATTTCGCG ATATGTTAATGAAATTGTTGAAACGATACCTGATAGCGAATTCGATGAATTCAGACATCATCGTGGCGCAACATCCTATC ATCCAAAAATGATGTTAAAAATCATCTTATATGCATATACTCAATCTGTATTTTCTGGTCGTAGAATAGAAAAATTACTT CATGACAGTATTCGAATGATGTGGTTAGCTCAAGATCAAACACCTTCTTATAAAACTATTAATCGTTTTAGAGTGAATCC TAATACTGATGCGTTAATTGAATCTTTATTTATTCAGTTCCATAGTCAATGTTTAAAGCAAAATCTTATTGATAATAATT CAATTTTTATTGATGGTACAAAAGTAGAAGCTAATGCCAATAGATATACATTTGTGTGGAAGAAAAGTATTCAAAATCAC GAATCGAAATTGAACGAAAATTCAAAAACATTATATCGTGACTTAGTTGAAGAAAAAATAATACCAGAGATAAAAGAAGA TGGAGATAGCGATTTAACAATAGAAGAAATAGATTTAATTGGTAGTCATTTAGATAAAGAAATCGAAGATTTAAATCATT CTATTGAGAACGAAGATTGTGCTCAAATTAGAAAACAGACCCGTAAAAAAATAACTGAGATTAAGAAGTTCAAAAAGAAA TTTGATGATTATTCCGAAAGAAAAAATAAATATGAAGAACAAAAATCGATTCTTAAAGATAGAAATAGTTTTTCTAAAAC TGATCTGATCATGATGCAACTTTTATGAGAATGAAGGAAGACCATATGAAAAATGGCCAACTTAAGCCAGGATACAATTT ACAAATAGCGACAAATTCTCAATTTGTTTTATCCTATGACCTATTTCAAAACCCAACAGATACTAGAACATTAATCCCAT TTTTAACAATGATTCAAAATACCTTCGGTTATTTACCAGAGTATATTGTAGCTGATGCAGGTTATGGTAGTGAGCAAAAC TATATGGCTATTATAGATGATTTTAATAAAACGCCACTTATTACGTATGGCATGTTTATTAAAGATAAAACTAGAAAGTT TAAAAGTGGCATTTTCAACACTCAAAATTGGAAATATGACGAACTTAATAATGAATTTATATGTCCTAATAACAAAAGAA TAGGTTTTAAAAGATATGCATACCGTAATGATAGATATGGTTTTAAACGAGACTTCAAACTATATGAATGTGATGACTGT TCATCATGTTCTTTGAGACATCAATGCATGAAACCAAATTCGAAATCCAATAAGAAAATCATGAAGAATTATAATTGGGA ATACTTTAAAGTCCAAATTAATCAAAAGCTTTCTGAACCAGAAACGAAAAACATCTATAGTCAAAGAAAAATTGATGTAG AGCCTGCTTTTGGATTTATGAAGGCTATTTTGGGTTTCACTCGAATGTCAGTTCGAGGAATAAATAAAGTTAAACGAGAG CTAGGTTTTGTATTGATGGCACTTAATATAAGGAAAATAGCAGCTCAACGAGCTGTACATTATAAAATACATATCAAAAA AGCTGATTTCTATCAAATAATTAATAGAAATCAGCTTTTTTACATTGCCTAA Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0076 | NP_763631.1 | transposase | Not tested | SCCpbp4 | DNA | e-245 | 85.1 |
| unnamed | - | hypothetical protein | Not tested | Type-IVa SCCmec | DNA | e-244 | 84.5 |
| unnamed | - | - | Not tested | Type-IVa SCCmec | DNA | e-244 | 84.5 |
| unnamed | - | - | Not tested | Type-IVb SCCmec | DNA | e-244 | 84.5 |
| unnamed | - | - | Not tested | Type-I SCCmec | DNA | 0.0 | 84.1 |
| SACOL0036 | YP_184947.1 | IS1272 transposase | Not tested | Type-I SCCmec | DNA | e-244 | 83.1 |
| MW0034 | NP_644849.1 | hypothetical protein | Not tested | Type-IV SCCmec | DNA | e-244 | 83.1 |
| SAMSHR1132_00350 | YP_005324559.1 | putative transposase | Not tested | Type-IIIinv SCCmec | DNA | e-244 | 83.1 |
| unnamed | BAA86649.1 | hypothetical protein | Not tested | Type-I SCCmec | DNA | e-244 | 83.1 |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | DNA | e-244 | 83.1 |
| unnamed | - | - | Not tested | Type-IIIinv SCCmec | DNA | 0.0 | 82.7 |
