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Name : SAUSA300_pUSA010001 (SAUSA300_pUSA010001) Accession : YP_492679.1 Strain : Genome accession: NC_007790 Putative virulence/resistance : Unknown Product : replication protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG5655 EC number : - Position : 1 - 996 bp Length : 996 bp Strand : + Note : identified by match to protein family HMM PF01446 DNA sequence : ATGCAATATAATACTACTAGAAGTATAACCGAAAATCAAGATAATAAAACGTTAAAAGATATGACGAAAAGTGGGAAACA ACGCCCATGGAGAGAAAAGAAAATAGATAATGTAAGCTATGCAGATATACTAGAAATTTTAAAAATCAAAAAGGCTTTTA ATGTAAAACAATGTGGTAATATTTTAGAATTTAAGCCAACTGATGAAGGCTATTTGAAGTTACATAAGACATGGTTTTGT AAATCAAAATTATGTCCGGTTTGTAATTGGAGACGTGCTATGAAAAATAGTTATCAAGCTCAAAAAGTGATTGAAAAAGT AATTAAGGAAAAGCCAAAAGCACGTTGGTTGTTTTTAACACTTTCAACAAAAAATGCGATAGATGGAGATACTTTAGAAC AAAGTTTGAAGCATCTAACTAAAGCATTTGATAGGTTGAGTAGATATAAAAAGGTTAAACAAAATCTTGTTGGATTTATG CGTTCAACAGAAGTTACCGTTAATAAAAATGACGGTAGTTATAATCAGCACATGCATGTTTTGTTATGTGTTGAAAATGC ATATTTTAGAAAAAAAGAGAATTATATAACTCAAGAAGAATGGGTTAATTTATGGCAAAGAGCATTACAAGTTGACTATC GACCTGTTGCTAATGTTAAAGCGATCAAACCGAATAGAAAAGGCGATAAAGACATTGAATCGGCAATCAAAGAGACCTCA AAATATTCGGTTAAATCATCTGATTTTTTAACTGATGATGATGAAAAAAATCAAGAAATTGTAAGTGATTTAGAAAAAGG TTTGTATCGAAAACGTATGTTAAGTTATGGTGGATTGCTTAAACAAAAACATAAAATTTTAAACTTAGACGATGTCGAAG ATGGTAATTTGATTAATGCAAGTGATGAAGATAAAACAACAGACGAAGAAGAAAAAGCACATTCAATTACCGCAATTTGG AATTTCGAAAAGCAAAATTATTATTTAAGACATTAG Protein sequence : MQYNTTRSITENQDNKTLKDMTKSGKQRPWREKKIDNVSYADILEILKIKKAFNVKQCGNILEFKPTDEGYLKLHKTWFC KSKLCPVCNWRRAMKNSYQAQKVIEKVIKEKPKARWLFLTLSTKNAIDGDTLEQSLKHLTKAFDRLSRYKKVKQNLVGFM RSTEVTVNKNDGSYNQHMHVLLCVENAYFRKKENYITQEEWVNLWQRALQVDYRPVANVKAIKPNRKGDKDIESAIKETS KYSVKSSDFLTDDDEKNQEIVSDLEKGLYRKRMLSYGGLLKQKHKILNLDDVEDGNLINASDEDKTTDEEEKAHSITAIW NFEKQNYYLRH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAV0029 | NP_370553.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 2e-69 | 56 |
| SA0028 | NP_373267.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 5e-68 | 55 |
