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Name : ycbS (Y75_p0912) Accession : YP_489212.1 Strain : Escherichia coli K-12 Genome accession: NC_007779 Putative virulence/resistance : Virulence Product : outer membrane usher protein Function : - COG functional category : - COG ID : - EC number : - Position : 999638 - 1002238 bp Length : 2601 bp Strand : + Note : ECK0931:JW0923:b0940 DNA sequence : ATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGT GTCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAGATGATCCCTCAATGGTGGCCGATT TGTCTCGTTTCGAAAAAGGACAAAAAATAACGCCAGGGGTTTATCGTGTCGATATTGTTCTGAATCAGACAATTGTAGAT ACGCGCAACGTCAATTTTGTTGAGATAACGCCAGAGAAGGGGATTGCCGCCTGTTTGACGACTGAAAGCCTGGATGCAAT GGGTGTTAATACTGATGCGTTTCCGGCTTTTAAACAACTGGACAAACAAGCGTGTGTGCCATTGGCGGAGATTATTCCGG ATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGT GGTTATGTCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTAT TCATAGCAGCGCAGACAGTGATTCTGGCGACAGCTATTTTCTGAATTTAAACAGTGGCGTTAATTTAGGCCCATGGAGAT TGCGCAACAATTCAACATGGAGTCGTAGTAGTGGCCAAACCGCAGAATGGAAGAATCTCAGCAGCTATTTGCAACGGGCG GTTATTCCTCTGAAAGGCGAACTGACCGTAGGTGATGATTATACTGCAGGCGATTTTTTCGATAGTGTCAGCTTTCGTGG TGTGCAGCTGGCGTCAGATGACAACATGCTGCCAGACAGCCTGAAAGGGTTTGCGCCTGTGGTGCGTGGTATCGCCAAAA GCAATGCCCAGATAACGATTAAGCAAAATGGTTACACCATTTACCAAACTTATGTATCGCCTGGTGCTTTTGAAATTAGT GATCTCTATTCCACGTCGTCGAGCGGTGATTTGTTAGTTGAAATCAAAGAAGCGGACGGCAGCGTCAATAGCTACAGCGT ACCGTTCTCCAGTGTGCCATTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATA GTAATGAACAGCAGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGT GGACAATATGCTGAATATTACCGTGCCGCCATGTTTGGTCTGGGATTTAACCTCGGCGATTTCGGAGCAATTTCGTTCGA TGCGACCCAGGCGAAGAGTACGCTAGCAGATCAAAGCGAACATAAAGGTCAGTCATATCGTTTTCTGTATGCCAAAACGC TCAACCACTTGGGCACTAACTTTCAATTGATGGGCTATCGCTATTCGACGTCGGGTTTCTACACCCTTTCCGACACCATG TATAAACATATGGATGGCTACGAATTTAATGACGGTGATGATGAAGATACGCCGATGTGGTCGCGTTATTACAATTTGTT TTACACCAAACGTGGCAAACTGCAGGTCAATATCTCCCAGCAATTAGGCGAGTACGGTTCGTTTTATTTAAGTGGTAGCC AGCAAACTTACTGGCATACGGATCAACAGGATCGGCTATTACAGTTTGGCTACAACACGCAAATTAAAGATCTTTCGCTG GGGATTTCCTGGAACTACAGTAAGTCCCGTGGTCAACCTGATGCTGATCAGGTGTTTGCTCTAAATTTTTCCCTGCCGCT CAATCTGTTGCTCCCCAGAAGTAATGATAGCTATACCAGGAAAAAAAATTACGCCTGGATGACCTCTAACACCAGTATCG ATAACGAAGGGCACACTACACAAAACCTGGGTTTAACGGAGACATTACTCGATGACGGTAACCTGAGCTACAGCGTGCAA CAGGGATATAACAGCGAGGGGAAAACGGCTAATGGTAGCGCCAGCATGGATTACAAAGGGGCGTTTGCGGATGCCCGAGT GGGCTACAACTACAGCGATAACGGCAGTCAACAACAACTGAACTACGCTCTTTCAGGCAGTTTAGTTGCCCATTCACAGG GCATTACCCTGGGGCAATCGCTGGGGGAAACTAACGTTCTGATTGCAGCACCAGGCGCAGAGAATACTCGTGTGGCGAAC AGCACCGGGCTGAAAACTGACTGGCGCGGATATACCGTTGTTCCTTATGCCACTTCTTATCGGGAAAATCGAATCGCACT TGATGCGGCGTCGTTAAAACGTAACGTGGATCTTGAAAATGCAGTAGTCAACGTGGTTCCCACCAAAGGGGCGTTGGTTC TGGCGGAGTTCAATGCCCATGCGGGTGCAAGGGTATTAATGAAAACATCAAAGCAGGGTATACCGCTGCGTTTTGGCGCG ATAGCGACGCTGGACGGCGTACAGGCTAATAGCGGCATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGC GAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCTCCCGATCAAATTTGTCATATCAATTACGAGCTTACCGAACAACAAA TTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAA Protein sequence : MYRTHRQHSLLSSGGVPSFIGGLVVFVSAAFNAQAETWFDPAFFKDDPSMVADLSRFEKGQKITPGVYRVDIVLNQTIVD TRNVNFVEITPEKGIAACLTTESLDAMGVNTDAFPAFKQLDKQACVPLAEIIPDASVTFNVNKLRLEISVPQIAIKSNAR GYVPPERWDEGINALLLGYSFSGANSIHSSADSDSGDSYFLNLNSGVNLGPWRLRNNSTWSRSSGQTAEWKNLSSYLQRA VIPLKGELTVGDDYTAGDFFDSVSFRGVQLASDDNMLPDSLKGFAPVVRGIAKSNAQITIKQNGYTIYQTYVSPGAFEIS DLYSTSSSGDLLVEIKEADGSVNSYSVPFSSVPLLQRQGRIKYAVTLAKYRTNSNEQQESKFAQATLQWGGPWGTTWYGG GQYAEYYRAAMFGLGFNLGDFGAISFDATQAKSTLADQSEHKGQSYRFLYAKTLNHLGTNFQLMGYRYSTSGFYTLSDTM YKHMDGYEFNDGDDEDTPMWSRYYNLFYTKRGKLQVNISQQLGEYGSFYLSGSQQTYWHTDQQDRLLQFGYNTQIKDLSL GISWNYSKSRGQPDADQVFALNFSLPLNLLLPRSNDSYTRKKNYAWMTSNTSIDNEGHTTQNLGLTETLLDDGNLSYSVQ QGYNSEGKTANGSASMDYKGAFADARVGYNYSDNGSQQQLNYALSGSLVAHSQGITLGQSLGETNVLIAAPGAENTRVAN STGLKTDWRGYTVVPYATSYRENRIALDAASLKRNVDLENAVVNVVPTKGALVLAEFNAHAGARVLMKTSKQGIPLRFGA IATLDGVQANSGIIDDDGSLYMAGLPAKGTISVRWGEAPDQICHINYELTEQQINSAITRMDAICR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 0.0 | 48 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 0.0 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ycbS | YP_489212.1 | outer membrane usher protein | VFG0876 | Protein | 0.0 | 49 |
| ycbS | YP_489212.1 | outer membrane usher protein | VFG0446 | Protein | 0.0 | 49 |
| ycbS | YP_489212.1 | outer membrane usher protein | VFG1645 | Protein | 0.0 | 46 |
| ycbS | YP_489212.1 | outer membrane usher protein | VFG0912 | Protein | 0.0 | 46 |
| ycbS | YP_489212.1 | outer membrane usher protein | VFG0454 | Protein | 2e-170 | 45 |
