Gene Information

Name : fepD (Y75_p0579)
Accession : YP_488879.1
Strain : Escherichia coli K-12
Genome accession: NC_007779
Putative virulence/resistance : Virulence
Product : iron-enterobactin transporter subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 620408 - 621412 bp
Length : 1005 bp
Strand : -
Note : ECK0583:JW0582:b0590; membrane component of ABC superfamily

DNA sequence :
ATGTCTGGTTCTGTTGCCGTGACACGCGCCATTGCCGTGCCCGGATTGCTGTTATTACTGATTATCGCGACGGCATTAAG
CCTGCTCATTGGGGCAAAATCACTCCCCGCTTCCGTAGTGCTGGAGGCCTTCTCCGGCACCTGCCAGAGCGCCGACTGCA
CCATCGTGCTCGACGCGCGGCTGCCGCGTACCCTTGCCGGTTTACTGGCAGGCGGCGCGCTTGGCCTTGCCGGGGCGTTA
ATGCAAACCCTCACCCGAAACCCACTTGCCGACCCCGGCTTGCTTGGCGTGAACGCCGGAGCCAGCTTTGCCATTGTGCT
GGGTGCGGCGCTGTTTGGTTACTCTTCCGCGCAGGAACAACTGGCGATGGCCTTCGCCGGGGCGCTGGTGGCCTCATTGA
TTGTTGCCTTTACCGGCAGTCAGGGCGGCGGGCAGTTAAGTCCGGTGCGTTTAACCCTGGCGGGCGTGGCGCTGGCGGCG
GTGCTGGAAGGACTGACCAGCGGCATCGCCCTGCTTAATCCTGACGTCTACGATCAGTTGCGTTTCTGGCAAGCCGGTTC
GCTGGATATTCGCAATCTACATACCTTAAAAGTGGTGCTGATCCCGGTGCTGATCGCCGGAGCAACTGCGCTATTACTGA
GTCGCGCGCTGAACAGTTTGAGCCTCGGCAGCGACACCGCGACGGCGCTGGGCAGTCGCGTGGCGCGCACACAGTTGATT
GGTCTGCTGGCGATTACCGTGCTTTGTGGTAGTGCGACGGCAATAGTTGGCCCGATTGCCTTTATTGGCCTGATGATGCC
GCATATGGCGCGTTGGCTGGTGGGTGCCGATCATCGCTGGTCGCTGCCCGTCACGCTACTTGCTACCCCTGCCCTGCTGC
TGTTTGCCGATATCATCGGGCGGGTGATTGTGCCCGGCGAACTGCGCGTTTCTGTGGTCAGTGCGTTTATTGGTGCACCG
GTGCTGATCTTCCTCGTGCGACGTAAAACGCGAGGTGGTGCATGA

Protein sequence :
MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEAFSGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGAL
MQTLTRNPLADPGLLGVNAGASFAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAA
VLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALNSLSLGSDTATALGSRVARTQLI
GLLAITVLCGSATAIVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAP
VLIFLVRRKTRGGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 9e-28 46
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 9e-28 46
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 9e-28 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 9e-28 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_488879.1 iron-enterobactin transporter subunit VFG0926 Protein 3e-103 99