|
Name : insD (Y75_p3457) Accession : YP_491718.1 Strain : Escherichia coli K-12 Genome accession: NC_007779 Putative virulence/resistance : Unknown Product : IS2 element protein Function : - COG functional category : - COG ID : - EC number : - Position : 3742944 - 3743867 bp Length : 924 bp Strand : - Note : ECK0358:JW5933:unique to W3110 DNA sequence : ATATGGACGGGCAAAAAAGTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAAGCTTAGTCAGCCGTTGTCT CCGGGTGTCGCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTG ATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTG CTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCT GTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGC GATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGTGTCACGTTCGCGCTGGACTGCTGTGAT CGTGAGGCACTGCACTGGGCGGTCACTACCGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGA ACGCCGCTTCGGCAACGATCTTCCGTCGTCTCCAGTGGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAA CACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAG AGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGC AGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGC GGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAG Protein sequence : MWTGKKVDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWAL LRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCD REALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAE SFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| S4061 | NP_839230.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 3e-139 | 99 |
| S3189 | NP_838472.2 | insertion element IS2 transposase InsD | Not tested | SHI-1 | Protein | 1e-137 | 99 |
| S4050 | NP_839218.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 7e-139 | 99 |
| tnpF | AAD44739.1 | TnpF | Not tested | SHI-2 | Protein | 7e-122 | 99 |
| SF3708 | NP_709447.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 7e-139 | 99 |
| SF3721 | NP_709460.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 7e-139 | 99 |
| SF2985 | NP_708759.1 | insertion element IS2 transposase InsD | Not tested | SHI-1 | Protein | 6e-120 | 99 |
| unnamed | AAL67379.1 | transposase-like protein | Not tested | PAI II CFT073 | Protein | 1e-118 | 97 |
| insD | YP_002414033.1 | insertion element IS2 transposase InsD | Not tested | Not named | Protein | 1e-135 | 97 |
| unnamed | CAC39284.1 | hypothetical protein | Not tested | LPA | Protein | 2e-119 | 97 |
| ECO111_3773 | YP_003236109.1 | putative IS2 transposase InsAB | Not tested | LEE | Protein | 1e-120 | 94 |
| aec49 | AAW51732.1 | Aec49 | Not tested | AGI-3 | Protein | 4e-121 | 84 |
| unnamed | CAC39283.1 | hypothetical protein | Not tested | LPA | Protein | 1e-83 | 63 |
| insD | YP_854263.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 5e-65 | 60 |
| insD | AAZ04432.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 4e-65 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| insD | YP_491718.1 | IS2 element protein | VFG0608 | Protein | 3e-139 | 99 |
| insD | YP_491718.1 | IS2 element protein | VFG0621 | Protein | 3e-139 | 99 |
| insD | YP_491718.1 | IS2 element protein | VFG0649 | Protein | 3e-120 | 99 |
| insD | YP_491718.1 | IS2 element protein | VFG1732 | Protein | 5e-136 | 97 |
