Gene Information

Name : yghF (Y75_p2899)
Accession : YP_491167.1
Strain : Escherichia coli K-12
Genome accession: NC_007779
Putative virulence/resistance : Virulence
Product : secretion pathway protein, C-type protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3110710 - 3111576 bp
Length : 867 bp
Strand : -
Note : ECK2965:JW5484:b2970

DNA sequence :
ATGTTCTGGCTGATGCTGCTTATTATTTCTGCAAAAATGGCGCATTCACTCTGGCGCTATATCTCCTTTTCTGCGGAATA
TACGGCGGTTTCTCAACCGGTGAATAAACCGAGCCGTGTGGATGCAAAAACGTTCGATAAAAATGACGTGCAATTAATCA
GCCAGCAAAACTGGTTTGGCAAATATCAGCCTGTCGCCGCGCAGGTAAAACAACCCGAACCTGTGCCTGTGGCAGAAACG
CGTCTTAATGTGGTGCTGCGTGGGATCGCCTTTGGTGCCAGACCCGGCGCGGTTATTGAAGAAGGCGGTAAACAGCAGGT
CTATTTGCAGGGTGAAACGCTTGGCTCTCACAACGCGGTGATTGAGGAAATCAACCGCGACCATGTGATGCTGCGTTATC
AGGGAAAAATAGAGCGTCTGAGTCTGGCAGAAGAGGAACGTTCCACTGTTGCTGTGACCAACAAAAAAGCCGTCAGTGAC
GAAGCAAAGCAAGCTGTTGCTGAGCCTGCTGTCAGTGTGCCAGTTGAGATCCCGGCTGCCGTGCGTCAGGCACTGGCGAA
AGATCCGCAGAAAATTTTTAACTATATCCAGCTTACGCCTGTGCGTAAGGAGGGGATTGTCGGTTATGCAGCGAAGCCGG
GGGCAGATCGTTCTCTGTTCGATGCCAGCGGTTTCAAGGAAGGCGATATCGCCATTGCGCTAAATCAGCAGGATTTCACT
GATCCACGAGCAATGATTGCTCTGATGCGGCAGTTACCTTCAATGGATTCCATTCAACTTACGGTTTTACGCAAGGGTGC
GCGCCACGACATTTCCATCGCGCTGCGCTACCGACTATTCTGCCCGCCTTACTGGAAGAAGAGCTGA

Protein sequence :
MFWLMLLIISAKMAHSLWRYISFSAEYTAVSQPVNKPSRVDAKTFDKNDVQLISQQNWFGKYQPVAAQVKQPEPVPVAET
RLNVVLRGIAFGARPGAVIEEGGKQQVYLQGETLGSHNAVIEEINRDHVMLRYQGKIERLSLAEEERSTVAVTNKKAVSD
EAKQAVAEPAVSVPVEIPAAVRQALAKDPQKIFNYIQLTPVRKEGIVGYAAKPGADRSLFDASGFKEGDIAIALNQQDFT
DPRAMIALMRQLPSMDSIQLTVLRKGARHDISIALRYRLFCPPYWKKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspC CAE85235.1 GspC, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-112 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yghF YP_491167.1 secretion pathway protein, C-type protein VFG2046 Protein 1e-111 93