Gene Information

Name : RPB_0733 (RPB_0733)
Accession : YP_484355.1
Strain : Rhodopseudomonas palustris HaA2
Genome accession: NC_007778
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 823096 - 823878 bp
Length : 783 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCGGACACGGCTTCCTCGCCGCGCGAAACCTCGGCGTCGCGCTGTCCGGCCGGCAGGTGCTGCACGGCGTCTCGCT
GGATCTCGCGCGCGGCCATCTGGTCGCTTTGGTCGGGCCGAACGGCGCGGGCAAGACCACGCTGCTGCGCGCGCTGGCCG
GACTGATCGCGGCGAGCGGCGAGGTGACGATCGGCGGCGACGCGCTGGCGGCGCTGCCATTGCGAGAACGGGCGCGCCGC
TTCGGCTATCTGCCGCAGGGCCATCTGGTGCATTGGCCGCTGCCGGCGCGCGACGTGGTCGCGCTCGGCCGGTTTCCGCA
CGGCGCCACCGATCCGGCGCGGTTGTCGCCGCGCGACGCCGAGGCGGTCGCGCGGGCGATGCGGATCACCGAAACCGAGC
CGTTCGCCGATCGCAACGTCACCGAACTCTCCGGCGGCGAGCGCAGCCGCGTCGCGCTGGCGCGCGTCCTCGCCGTCGAG
GCGCCGGTGGTGCTGGCGGACGAGCCGACTGCGTCGCTCGATCCGCGCTATCAGCTCGACGTGATGCGGACGCTGCGGCA
GGCGGCCGATGCCGGCACGCTGGTGATCGTGGTGACGCACGATCTAGGCCTCGCGGCGCGCTTCGCCGACACGGTTCTGG
TGATGGCGGCCGGGCGGCTAGCGGCGCAGGGCACGCCGCATCAGGCGCTGTCGGACGACGTGCTGCGGCAGGTGTTTCGC
GTCAGCGCCTATCGGGCGGACTATCAGGACAGCGGCGTGATCCTGCCCTGGGCGGGGGTCTGA

Protein sequence : 
MSGHGFLAARNLGVALSGRQVLHGVSLDLARGHLVALVGPNGAGKTTLLRALAGLIAASGEVTIGGDALAALPLRERARR
FGYLPQGHLVHWPLPARDVVALGRFPHGATDPARLSPRDAEAVARAMRITETEPFADRNVTELSGGERSRVALARVLAVE
APVVLADEPTASLDPRYQLDVMRTLRQAADAGTLVIVVTHDLGLAARFADTVLVMAAGRLAAQGTPHQALSDDVLRQVFR
VSAYRADYQDSGVILPWAGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-22 42
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 2e-18 41
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 1e-18 41
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 1e-18 41
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 1e-18 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPB_0733 YP_484355.1 ABC transporter BAC0164 Protein 3e-22 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPB_0733 YP_484355.1 ABC transporter VFG1042 Protein 2e-22 42