|
Name : RPB_4539 (RPB_4539) Accession : YP_488133.1 Strain : Rhodopseudomonas palustris HaA2 Genome accession: NC_007778 Putative virulence/resistance : Virulence Product : KpsF/GutQ family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 5133173 - 5134183 bp Length : 1011 bp Strand : + Note : - DNA sequence : ATGGCGCTTTCAAAACCCCGTACGACAAAACCCGCGATGACAGATTCAGCCGCCGCGATCCCCTCGGCCCTGCGCACGCT GGAGGCCGAAGCCGACGGCGTCACCGCGCTCGCCGCAGCGCTGCGATCCGACCTCGGCAGCGCCTTCGCGGCGGCGATCG AGACCATCCGCAACGCCAAGGGCCGGCTGATCATCACCGGGCTCGGCAAATCCGGACATATCGGCCGCAAGATCGCCGCG ACCTTCGCCTCGACCGGCACGCCGGCGTTCTTCGTCCACGCCTCCGAAGCCAGCCACGGTGATCTCGGCATGATCACCGC CGACGACATTATTCTCGCGATGTCGTGGTCCGGCGAGCAGCCGGAAATGAAGAACCTGATCTCTTACGCCAAGCGGTTCA GGATCGCGCTGATCGCGATGACCTCCGACTCGGGCTCGACGCTGGCCAAGGCCGCGGATATCTCGCTGACGCTGCCGAAG GCGCGCGAGGCCTGCCCGCACAATCTGGCGCCGACCACCTCGTCGCTGATGATGCTGGCGCTCGGCGACGCGATCGCGAT CGCGCTGCTGGAGAGCCGCGGCTTCACCTCGACCGATTTCAGCGTGCTGCATCCCGGCGGCAAACTCGGCGCGATGCTGA AATACGCCCGCGACCTGATGCACACCGGTGACGCCGTGCCGCTGAAGCCGCTCGGCACCAAGATGTCGGATGCACTGGTC GAGATGTCGGCCAAGGGCTTCGGCTGCGTCGGCATCGTCGACGCCAGCGGCGCCGTCGCCGGCATCGTCACCGACGGCGA TCTGCGCCGCCACATGCGCCCCGATCTGATGACCGCGACCGTCGACGAGGTGATGACCAAGCGGCCGAAGACGATCAGCC CCGGCCTGCTCGCCGGCGAGACGCTGGAATTGCTGAACTCCTCGAAGATCACCGCGCTCCTGGTGACCGAAGGCAACAAG CCGGTCGGCATCGTGCATCTGCACGACCTGCTGCGGGCGGGCGTGGCGTAG Protein sequence : MALSKPRTTKPAMTDSAAAIPSALRTLEAEADGVTALAAALRSDLGSAFAAAIETIRNAKGRLIITGLGKSGHIGRKIAA TFASTGTPAFFVHASEASHGDLGMITADDIILAMSWSGEQPEMKNLISYAKRFRIALIAMTSDSGSTLAKAADISLTLPK AREACPHNLAPTTSSLMMLALGDAIAIALLESRGFTSTDFSVLHPGGKLGAMLKYARDLMHTGDAVPLKPLGTKMSDALV EMSAKGFGCVGIVDASGAVAGIVTDGDLRRHMRPDLMTATVDEVMTKRPKTISPGLLAGETLELLNSSKITALLVTEGNK PVGIVHLHDLLRAGVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 1e-43 | 42 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 5e-44 | 42 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 1e-43 | 42 |
