|
Name : RPB_4247 (RPB_4247) Accession : YP_487846.1 Strain : Rhodopseudomonas palustris HaA2 Genome accession: NC_007778 Putative virulence/resistance : Virulence Product : ATPase AAA Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 4831092 - 4833731 bp Length : 2640 bp Strand : - Note : - DNA sequence : ATGAATCCAGAAAAATACACCGAACGCGTGCGCGGCTTCGTCCAGTCGGCGCAATCCCTGGCGGTCCGCGAGGGCCATCA GCAATTCTCGCCGCTGCATATTCTCAAAGTCCTGCTCGATGATTCCGAGGGGCTGGCCGGCGGTCTGATCGACCGCTCCG GCGGCAATTCCCGCGCGATCCTGAAGGCGACCGAAGACGCGCTCGGCAAGATGCCGAAGGTCTCCGGCTCGGGCGCCGGC CAGGTCTATCTGGCGCCGGCGACGGCGCGCGCGCTCGACGGCGCCGAGCAGGCCGCCGAAAAGGCCGGCGACAGCTTCGT CACCGTGGAGCGGCTGCTGCTGGCGCTGTCGCTCGACAAAGATTCCGAGGCCGGGCAGTTGCTCGCCAAGGGCGGCGTCA CCCCGCAGAATCTCAACGCCGCGATCAACGCGCTGCGCAAGGGCCGCACCGCGGACAGCGCCACGGCCGAAAACGCCTAT GACGCGCTGAAGAAATACGCCCGGGATCTCACCCAGGCGGCGCGCGACGGCAAGCTCGACCCGGTGATCGGCCGCGACGA GGAAATCCGCCGGACGATCCAGGTGCTGTCGCGCCGCACCAAGAACAATCCCGTCCTGATCGGCGAACCCGGCGTCGGCA AGACCGCGATCGTCGAGGGTCTGGCGCTGCGCATCCTCAATGGCGACGTGCCGGAGAGCCTGAAGGACAAGAAGCTGCTG GCGCTCGACATGGGCGCGCTGATCGCGGGCGCGAAATATCGCGGCGAGTTCGAGGAGCGGCTGAAGGCCGTGCTCAACGA GGTCACCGCGGCCGCCGGCGGCATCGTGCTGTTCATCGACGAGATGCACACGCTGGTCGGCGCCGGCAAGGCCGACGGCG CGATGGATGCGTCCAATCTGCTGAAGCCCGCGCTGGCGCGCGGCGAGCTGCACTGCATCGGCGCCACCACGCTCGATGAA TATCGCAAGCACGTCGAGAAGGACGCCGCTTTGGCGCGGCGGTTCCAGCCGGTGTTCGTGTCCGAGCCGACCGTCGAGGA CACCATCTCGATCCTGCGCGGCCTGAAGGACAAATACGAGCAGCATCACGGCGTGCGCATTGCCGATTCGGCGCTGGTGG CCGCCACCACGCTGTCGAATCGCTACATCACCGATCGCTTCCTGCCCGACAAGGCGATCGACCTGATGGACGAGGCCGCG GCGCGGCTGAAGATGCAGGTCGATTCCAAGCCGGAAGAACTCGATTCGATGGACCGCGAGATCGTGCGGCTCAAGATCGA GCAGGAGGCGCTGAAGAAGGAGAGCGACGCCGGCTCCAAATCGCGCCTCGTCACGCTGGAAAAGGAGCTCGCCGATCTCG AGGAGAAGTCGGCCGCGCTGACGCAGCGCTGGAGCGCGGAGAAGAACAAGCTCTCGGACGCCCAGAAGCTGAAGAGCGAG CTCGACGGGTTGCGGCTCGAACTCGCCGACGCGCAGCGTCGCGGCGAGTATCAGCGCGCCGGCGAACTGGCCTATGGCCG GATCCCGGAGCTGGAGAAGCGGCTTGCGGACATCGAAGCCAACGAGAATGCCGGCGAGATGATGGAGGAGGCGGTCACCG CCGATCACATCGCCCAGGTGGTGTCGCGCTGGACCGGCGTGCCGGTCGACAAGATGCTCGAGGGCGAGAAGGAAAAGCTG CTGCGGATGGAAGAGCAGATCGGCAAGCGCGTGGTCGGCCAGTTCGAGGCCGTGCATGCGGTGTCGACCGCGGTCCGTCG TGCGAGGGCCGGGCTGCAGGACCCGAACCGGCCGATGGGCTCGTTCATGTTCTTGGGGCCCACCGGCGTCGGCAAGACCG AGCTGACCAAGGCGCTGGCGCAATATCTGTTCGACGACGAGACTGCGATGGTCCGGCTCGACATGTCGGAATACATGGAG AAGCACTCGGTCGCCCGGCTGATCGGCGCGCCTCCGGGCTATGTCGGCTACGACGAGGGCGGCGCGCTTACCGAAGCGGT GCGGCGCCGGCCGTATCAGGTGGTGCTGTTCGACGAGATCGAGAAGGCGCATCCGGACGTGTTCAACGTGCTGCTGCAGG TGCTCGACGACGGCCGCCTGACCGACGGGCAGGGCCGCACCGTCGACTTCCGCAACACGCTGATCGTGATGACGTCGAAT CTCGGCTCGGAATATCTGGTCAACCAGCCCGAGGGCGAGGACACCGGGGTGGTGCGCGAACAGGTGATGGACATGGTGCG GGCGCATTTCCGGCCGGAATTCCTCAACCGGGTCGACGAGATCATCCTGTTCCACCGCCTGCAGAAGAACGAAATGGGCC GGATCGTCGACATCCAGTTCAGCCGGCTGGCGAAGCTGCTGGAGGATCGCAAGATCGTGCTCGATCTCGACCCCGCCGCG CGCGACTGGCTCGCCGAGAAGGGCTGGGACCCCGCCTATGGGGCGCGTCCCCTGAAGCGGGTGATCCAGCGCCATGTGCA GGACCCGCTCGCCGAGATGATCCTCGACGGCACCGTCAGCGACGGCGCGAAGGTGGCGATCTCGACCGAAGGCGGCGTCC TGACCTTCAACGGCGCCCCGCCGCACACCGCCGATGTCGAGCCGTTCCCCGGGCGTCCGCCGAAGCGGATGCTGAACTGA Protein sequence : MNPEKYTERVRGFVQSAQSLAVREGHQQFSPLHILKVLLDDSEGLAGGLIDRSGGNSRAILKATEDALGKMPKVSGSGAG QVYLAPATARALDGAEQAAEKAGDSFVTVERLLLALSLDKDSEAGQLLAKGGVTPQNLNAAINALRKGRTADSATAENAY DALKKYARDLTQAARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPESLKDKKLL ALDMGALIAGAKYRGEFEERLKAVLNEVTAAAGGIVLFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCIGATTLDE YRKHVEKDAALARRFQPVFVSEPTVEDTISILRGLKDKYEQHHGVRIADSALVAATTLSNRYITDRFLPDKAIDLMDEAA ARLKMQVDSKPEELDSMDREIVRLKIEQEALKKESDAGSKSRLVTLEKELADLEEKSAALTQRWSAEKNKLSDAQKLKSE LDGLRLELADAQRRGEYQRAGELAYGRIPELEKRLADIEANENAGEMMEEAVTADHIAQVVSRWTGVPVDKMLEGEKEKL LRMEEQIGKRVVGQFEAVHAVSTAVRRARAGLQDPNRPMGSFMFLGPTGVGKTELTKALAQYLFDDETAMVRLDMSEYME KHSVARLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTSN LGSEYLVNQPEGEDTGVVREQVMDMVRAHFRPEFLNRVDEIILFHRLQKNEMGRIVDIQFSRLAKLLEDRKIVLDLDPAA RDWLAEKGWDPAYGARPLKRVIQRHVQDPLAEMILDGTVSDGAKVAISTEGGVLTFNGAPPHTADVEPFPGRPPKRMLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-108 | 43 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 7e-107 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 6e-107 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RPB_4247 | YP_487846.1 | ATPase AAA | VFG2076 | Protein | 1e-120 | 43 |
| RPB_4247 | YP_487846.1 | ATPase AAA | VFG2084 | Protein | 7e-114 | 43 |
