|
Name : fliQ (RPB_3774) Accession : YP_487379.1 Strain : Rhodopseudomonas palustris HaA2 Genome accession: NC_007778 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliQ Function : - COG functional category : N : Cell motility COG ID : COG1987 EC number : - Position : 4310152 - 4310415 bp Length : 264 bp Strand : - Note : FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum DNA sequence : ATGACCGGTGCTGAAACTCTCGATATCGCCCGCGAAGCGGTCTGGACGATCGTGATCGTCTCGGCACCGCTGATGGTGGT CGGCCTGGTCGTCGGCGTGGCGGTGTCGCTGGTCCAGGCGCTGACCCAGATCCAGGAACAGACGCTGGTGTTCGTCCCGA AGATTCTGGCGATGTTCCTCACCTTGGTGCTGACGCTGCCGTTCATGGCCGACCGGCTGCACGCCGAAATGCTGCGGATC TCATCGCGAATCGTCGGCGGTTGA Protein sequence : MTGAETLDIAREAVWTIVIVSAPLMVVGLVVGVAVSLVQALTQIQEQTLVFVPKILAMFLTLVLTLPFMADRLHAEMLRI SSRIVGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcS | AAT96263.1 | HrcS | Virulence | S-PAI | Protein | 2.2 | 48 |
| hrcS | AAT96304.1 | HrcS | Virulence | S-PAI | Protein | 2.2 | 48 |
| hrcS | AAT96344.1 | HrcS | Virulence | S-PAI | Protein | 2.2 | 48 |
| hrcS | ABA47280.1 | HrcS | Virulence | S-PAI | Protein | 2.7 | 45 |
| ssaS | NP_456108.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 0.039 | 42 |
| ssaS | NP_805091.1 | type III secretion protein | Virulence | SPI-2 | Protein | 0.039 | 42 |
| ssaS | YP_216428.1 | secretion system apparatus protein SsaS | Virulence | SPI-2 | Protein | 0.031 | 42 |
| ssaS | NP_460385.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 0.031 | 42 |
| ssaS | CAA68200.1 | secretion system apparatus, SsaS | Virulence | SPI-2 | Protein | 0.022 | 42 |
| lscS | AAO18039.1 | LscS | Virulence | TTSS locus | Protein | 0.003 | 42 |
| escS | YP_003223489.1 | T3SS structure protein EscS | Virulence | LEE | Protein | 0.032 | 42 |
| escS | AAK26701.1 | EscS | Virulence | LEE | Protein | 0.022 | 42 |
| escS | YP_003232139.1 | T3SS structure protein EscS | Virulence | LEE | Protein | 0.032 | 42 |
| escS | AAL57528.1 | EscS | Virulence | LEE | Protein | 0.022 | 42 |
| escS | CAC81848.1 | EscS protein | Virulence | LEE II | Protein | 0.022 | 42 |
| hrcS | AAB06006.1 | HrcS | Virulence | Hrp PAI | Protein | 9.1 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliQ | YP_487379.1 | flagellar biosynthesis protein FliQ | VFG0395 | Protein | 5e-04 | 44 |
| fliQ | YP_487379.1 | flagellar biosynthesis protein FliQ | VFG0520 | Protein | 0.009 | 42 |
