Gene Information

Name : RPB_3336 (RPB_3336)
Accession : YP_486943.1
Strain : Rhodopseudomonas palustris HaA2
Genome accession: NC_007778
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 3816483 - 3817277 bp
Length : 795 bp
Strand : +
Note : -

DNA sequence : 
ATGACGCGCGAACCCCCGCCGATGATCGCCTATGACCGCGTCGACAAGAGCTTCGACGGCGGCCGCATCAAGGCGGTCGA
CGGCGTCTCGCTGTCCGTCATGCGCGGCGAACTGCTCGCCATCGTCGGCGGCTCCGGGTCCGGCAAGACCACGCTGCTGC
GCCTCGCCAATCGCCTGATCGACGCCGACGCGGGCACAGTCCGGATCGAGGGCGAGGACGTGCGAACGGCCGACCCGATC
GCGCTGCGCCGGCGCATCGGCATCGTGTTCCAGGCCGGCGCGCTGTTCCCGCATCTGTCCGTCGCCGACAATATCGGCAT
CACGCCGAAGTTGCTCGGCTGGCCGCACGACAGGATCGCCGCGCGCGTCGACGAGTTGCTCGACCTGGTGCGGCTCGACC
GCGCGCAGCACCGCGACCGCTTTCCGCACGAACTCTCCGGCGGCCAGCGCCAGCGCGTCGGCGTCGCCCGCGCGCTCGCC
GCCGGACCGAATATCGTCTTGATGGACGAGCCGTTCGGCGCGCTGGATCCTTTGACCCGCGACGCGCTCGGCGAGGATTT
TCGCGCGCTGCACGACCGGCTCGGGCTCACCACCGTGCTGATCACCCACGACATCACCGAGGCGCTCTTGCTCGCCGACC
GCATCGCGGTGATGCGCGCCGGCCGATTGCTGGCGCTTGGCCGCGCCGCGGAGCTGGCGCACAGCACCGAGCCCTATGTC
ACCGAACTCCTGCAGACGCCGCGCAGGCAGGCTCTCAGGCTCTCTGCGCTGCTGCCACAGGACGGCGCGGTATGA

Protein sequence : 
MTREPPPMIAYDRVDKSFDGGRIKAVDGVSLSVMRGELLAIVGGSGSGKTTLLRLANRLIDADAGTVRIEGEDVRTADPI
ALRRRIGIVFQAGALFPHLSVADNIGITPKLLGWPHDRIAARVDELLDLVRLDRAQHRDRFPHELSGGQRQRVGVARALA
AGPNIVLMDEPFGALDPLTRDALGEDFRALHDRLGLTTVLITHDITEALLLADRIAVMRAGRLLALGRAAELAHSTEPYV
TELLQTPRRQALRLSALLPQDGAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-37 47
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-37 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPB_3336 YP_486943.1 ABC transporter NC_008702.1.4606598. Protein 5e-16 43