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Name : RPB_2852 (RPB_2852) Accession : YP_486465.1 Strain : Rhodopseudomonas palustris HaA2 Genome accession: NC_007778 Putative virulence/resistance : Resistance Product : DEAD/DEAH box helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 3249096 - 3251282 bp Length : 2187 bp Strand : + Note : - DNA sequence : ATGTCAGCCCGCCGCGGCGCATTGCAATTGGCGCAAAATGCATCCAAGGCTGCGGGTCACATCCGCCCCAATCGAGCCGG CCCGATGCGTCCCGCTTTGCTCAATCCCCTGTTCGCCCCGGTCACCGGCCTCACCGGCGTCGGTCCGAAGCAGGACAAGC TGTTTCGCTATCTGCTGGATCGCGACGACACCCCGCGGCTGGCCGATCTGCTGTTGCATCTGCCGGTGAGCGTGATCGAT CGCCGCTCGCGGCCCAAGATCCGCGACGCCCAGCCCGGCACCGTGGTGACGCTGGAAGTCACCGTCGACCGCCACCGCCC GCCACCACCCGGTCGCTCACGCGCGCCCTATCTGGTCTATGCCAGCGACGAGACCGGCGACGTCATCCTGACCTTCTTCC GCGCCAAGCCGGAGTTCGTCGAGAAGCTGCTGCCGGTCGGCGCCAAGCGCTACGTCTCCGGCACCGGCCAGCTGTATGAC GGCACGCTGCAGATCGTGCATCCCGACCGCGTCGTCGACGAGGAAGGCTTCGCCAAGCTGCCGAAGATCGACCCGGTGTA TCCGCTCACCGAGGGGCTGGCGATCGGCTCGCTACGCCGCGCGGTGGCGCAGGCGCTGACCAGACTGCCGGCGCTGCCGG AATGGATCAGTCCCGAGGTGCTGCGACGCTGCAGCTTTCCCGCCTTCGCCGAGGCACTGCAGCGCGTCCATATCCCGCAT GAGCCGACCGACATCCTGCCCGACGGCCCGTTCTGGTCGCGCCTCGCCTATGACGAATTGCTCGCCGGACAATTGGCGCT GGCGCTGGTGCGGGCACAGCTCCGTCGCCCGGCCGGCACGCGCAATGCCGGCGACGGCCGGCTGCGCCACAAGATCATCG ACGCGCTGCCTTATGCGCTGACGGCCTCGCAACAGGCCGCTGCCGCCGCGATCGCGGAGGATCTGCAGCAACCTGTGCGG ATGCTGCGGCTGCTGCAGGGCGACGTCGGCTCCGGCAAGACCGTGGTGGCGCTGCTGGCCGCCGCCGCCGTCGCCGAGGC CGGCAAGCAGGCGGCGTTGATGGCGCCGACCGAAATTCTCGCGCGCCAGCACATCAAGACCATCGCGCCGCTGGCCGAAC GCGCCGGCATGCAGGTCGCGATCCTCACCGGCCGCGAGAAGGGCAAGGAGCGTCGCGATCTGTTGGCGCGGCTCGAAGCC GGCGAGATCGACTTTCTGGTCGGCACCCACGCGCTGATCCAGGACGACGTGACCTACAACTCGCTGGCGCTGGCCGTGGT CGACGAGCAGCATCGCTTCGGCGTCCGCGAGCGGCTGGCACTGACCTCGAAGGGCGACGCCGTCGACGTGCTGGTGCTGA GCGCGACGCCGATCCCGCGCACGCTGGTGCTGACCTATTTCGGCGACATGGACGTCTCGGAGTTGCGCGAGAAGCCCGCC GGCCGCCAGCCGATCGACACCCGCGCTTTGTCCGATACCCGCCTGCCCGAAGTGATCGACGGCATCGGCCGCGCCATCGC CGCCGGCAAGCGCGTCTACTGGATCTGCCCGCTGGTCGAGGAATCCGAAAACGTCAAGCTGACTGACGCCGAGCAGCGCT ACGAGTCGCTGCGGCAGCGCTTCGGCGATCAGCAGGTCGGTCTGGTGCACGGCCGGATGAAGGGCGCCGACAAAGACCGC GTGATGGCGCAGTTCGCCGGCGGCGAGATCAGCGTGCTGGTCGCCACCACCGTCGTGGAAGTCGGCGTCGACGTGCCCGA GGCCAGTATCATGGTGATCGAGAACGCCGAGCGCTTCGGCCTCGCGCAACTGCATCAATTGCGCGGTCGCATCGGTCGCG GCAGCGAGGCCTCGACCTGCCTGCTGCTGTACAAGGAGCCGCTCGGTGAGATGTCGGCGGCGCGGCTGCGGGTGATCCGC GAAACCGCCGATGGCTTCCGCATTGCCGAAGAAGATCTCAAGCTGCGCGGCGAAGGCGACGTGCTCGGCACCCGCCAGAG CGGCCTGCCCGGCTACCGCATCGCGCGCTCCGAGGTGCACGGCCAGTTGATCACCCAGGCCCGCGACGAAGCGCTGCGCA TCCTCGAGGACAATCCCAAGCTCGAAGGCCCATCCGGCGAGGCGCTGCGCTGCCTGCTGTATCTCTACGAACGCGACGAG GCGATTCCGCTGCTCGGCGCGGGGTAG Protein sequence : MSARRGALQLAQNASKAAGHIRPNRAGPMRPALLNPLFAPVTGLTGVGPKQDKLFRYLLDRDDTPRLADLLLHLPVSVID RRSRPKIRDAQPGTVVTLEVTVDRHRPPPPGRSRAPYLVYASDETGDVILTFFRAKPEFVEKLLPVGAKRYVSGTGQLYD GTLQIVHPDRVVDEEGFAKLPKIDPVYPLTEGLAIGSLRRAVAQALTRLPALPEWISPEVLRRCSFPAFAEALQRVHIPH EPTDILPDGPFWSRLAYDELLAGQLALALVRAQLRRPAGTRNAGDGRLRHKIIDALPYALTASQQAAAAAIAEDLQQPVR MLRLLQGDVGSGKTVVALLAAAAVAEAGKQAALMAPTEILARQHIKTIAPLAERAGMQVAILTGREKGKERRDLLARLEA GEIDFLVGTHALIQDDVTYNSLALAVVDEQHRFGVRERLALTSKGDAVDVLVLSATPIPRTLVLTYFGDMDVSELREKPA GRQPIDTRALSDTRLPEVIDGIGRAIAAGKRVYWICPLVEESENVKLTDAEQRYESLRQRFGDQQVGLVHGRMKGADKDR VMAQFAGGEISVLVATTVVEVGVDVPEASIMVIENAERFGLAQLHQLRGRIGRGSEASTCLLLYKEPLGEMSAARLRVIR ETADGFRIAEEDLKLRGEGDVLGTRQSGLPGYRIARSEVHGQLITQARDEALRILEDNPKLEGPSGEALRCLLYLYERDE AIPLLGAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 7e-143 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RPB_2852 | YP_486465.1 | DEAD/DEAH box helicase | BAC0356 | Protein | 6e-91 | 44 |
