Gene Information

Name : RPB_0285 (RPB_0285)
Accession : YP_483907.1
Strain : Rhodopseudomonas palustris HaA2
Genome accession: NC_007778
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 321674 - 322414 bp
Length : 741 bp
Strand : +
Note : -

DNA sequence : 
ATGGACAGCTTCATTGAACCCTCGTCACGGCCCGGCACCACGCCGGACACCATCTCCATTTCGAACGTCAATCTGTCGCT
GGGCAGTGGCGCCGCGCGGGTGCACATCCTCAAGGATATCAGCCTCCGCGTCGCGCCCGGCGAGGCGATCGGCCTGATCG
GCCCGTCGGGATCGGGCAAATCCACCCTGCTGATGGTGATGGCCGGGCTGGAGCGGCCCGACAGCGGTGAGGTGGTGGTC
AGCGGCACCGCTTTCAATGGCCTCAGCGAGGACGCCTTGGCGCGGTTTCGCGGCCGCGCCGTCGGCATCGTCTTCCAGTC
CTTTCATTTGATCCCGACCATGACGGCGCTGGAAAACGTCGCGGTGCCGCTCGAACTGGCCGGCACGCCCGACGCCGCCG
CGCGGGCGGCGCGCGAGCTGGCTTCGGTGGGACTTGGCGAACGGCTGAACCATTATCCGTCGCAGCTGTCCGGCGGCGAG
CAGCAGCGCGTCGCTTTGGCGCGGGCGCTGGCGCCCGACCCGGCGATCCTGGTCGCCGACGAGCCGACCGGCAATCTCGA
CGAGGCGACCGGCCGGCAGATCGTCGACCTCTTGTTCACCAAACATGCCGAACGCGGCATGACGCTGGTGCTGGTGACCC
ACGACACCGCGCTGGCGCAGCGTTGCGACCGCGTCGTCCGGCTGCGCTCCGGGCGGGTCGACACCACGATGCCGGGCAAT
GCCCGGGCACGATCGGCCTGA

Protein sequence : 
MDSFIEPSSRPGTTPDTISISNVNLSLGSGAARVHILKDISLRVAPGEAIGLIGPSGSGKSTLLMVMAGLERPDSGEVVV
SGTAFNGLSEDALARFRGRAVGIVFQSFHLIPTMTALENVAVPLELAGTPDAAARAARELASVGLGERLNHYPSQLSGGE
QQRVALARALAPDPAILVADEPTGNLDEATGRQIVDLLFTKHAERGMTLVLVTHDTALAQRCDRVVRLRSGRVDTTMPGN
ARARSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-29 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RPB_0285 YP_483907.1 ABC transporter NC_008702.1.4606598. Protein 1e-33 47
RPB_0285 YP_483907.1 ABC transporter NC_012469.1.7686878. Protein 3e-37 44
RPB_0285 YP_483907.1 ABC transporter CP001581.1.gene798.p Protein 3e-36 42