Gene Information

Name : RPB_0275 (RPB_0275)
Accession : YP_483897.1
Strain : Rhodopseudomonas palustris HaA2
Genome accession: NC_007778
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 309947 - 310693 bp
Length : 747 bp
Strand : -
Note : -

DNA sequence :
ATGAACGACCGCGTCGTCGTCATCACCGGAGGCAGCCGCGGCATCGGCCGCGCCACCGCGCTCGCCGCTGCGGCCCGCGG
CTTCAAGGTCGTGGTCGGCTACGCCAGCAATGCGGAGGCGGCGCAGGAGACCGTGTCGGCGATCGAGGCCAGCAACGGCC
GGGCGATCGCGGTGAAATGCGACGTCGGCGACGAGGCGGATATCATTGCTTTGTTCGAGGCCGCCGACAAATTCGGGACG
CTCGGCGCGCTGGTCAACAATGCCGGCATCGTCGGCCCGACCGCGCGGGTCGACGAGATGTCGGCGGAGCGCATCCAGCG
GATGATGGCGGTCAACGTCACGGGCAGCATCCTGTGCGCGCGCGAGGCGGTGAAGCGGTTGTCGACCCGGCACGGCGGCC
CCGGCGGCGTGATCATCAATCTGTCGTCGGTCGCAGCCAAACTCGGATCGCCGAATACTTACGTTGACTACGCCGCTTCC
AAGGGCGCGATCGATTCCTTCACTATCGGGCTCGGCCATGAGGTCGCCGGCGAAGGCATTCGCGTCGCCGCGATCCGCCC
CGGCCTGATCGACACCGAGATCCACGCCTCCGGCGGCGATCCGGACCGCGCCCACCGGCTCAGCGGCCATGTGCCGATGC
AGCGCGTCGGCCGCGCCGAGGAAATCGCCAACGCCGTGGTCTGGCTGATGTCGGACGAAGCCTCCTACGTCACCAGCGCC
ATCATCGATGTCTCGGGCGGACGATAG

Protein sequence :
MNDRVVVITGGSRGIGRATALAAAARGFKVVVGYASNAEAAQETVSAIEASNGRAIAVKCDVGDEADIIALFEAADKFGT
LGALVNNAGIVGPTARVDEMSAERIQRMMAVNVTGSILCAREAVKRLSTRHGGPGGVIINLSSVAAKLGSPNTYVDYAAS
KGAIDSFTIGLGHEVAGEGIRVAAIRPGLIDTEIHASGGDPDRAHRLSGHVPMQRVGRAEEIANAVVWLMSDEASYVTSA
IIDVSGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 2e-53 53
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 8e-56 52