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Name : RPB_2742 (RPB_2742) Accession : YP_486355.1 Strain : Rhodopseudomonas palustris HaA2 Genome accession: NC_007778 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 3125925 - 3127355 bp Length : 1431 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCACGACATCAAAGCGATCCGCGACAATCCGCAGGCGTTCGACGCGGCGTTCACGCGGCGGGGGCTGGCGCCGATCGC CGACAGCCTGATCAAGCTCGACGAGACCCGGCGCGCGGCGATCCTGGAGTCCGAGAAGGCGCAGGCGCGGCGCAATGCGG CGTCGAAGGAGATCGGCGACGCCAAGAAGGCCAAGGACAATGCGCGGGCCGACGCGCTGATGGCCGAGGTCGCCGAGCTC AAGACCACCATGCCGGCGCTCGAGGCCGCGGTGAAGGAGGCCGACGAGGCGCTGAAAAAGGCGCTGTCGGAAATCCCGAA TCTGCCGCTCGACGAGGTGCCGGAAGGCGCCGACGAGCACGGCAATGTCGACCATCATCGCTTCGGCGCCAAGCGCGACT ACGCGTTCACGCCCAAGGCTCACTACGATCTCGGCGAGGCGCTCGGGATGATGGACTTCGAAGCCGCCGCGAAGATCAGC GGCGCGCGCTTTGTCGTGCTGAAGAAGGGCCTCGCCCGGCTCGAACGCGCGATCGGGCAGTTCTTCCTCGACGTGCATAC TGGCGAGCATGGGTACACGGAAGTAAATCCTCCCCTGTTAGTGCGCGATGATGCAATGTTCGGGACGGCGCAGTTGCCGA AATTCAGGGAAGACCAGTTCCAGACTGTTACAGAAGAGGTTCGCCGAAGAACGATAGTCGAGTTTGTTTCGTCGGCAATG AAGCTCGGAGCATCGGCTACTGATGCTGGCGGTTCTGAGTTTGCTCGTCAGCTTGCTAACGAAGAGCTTGTGGATTTCAG TTATGCCAAGATGCCCGAGCGTTTTTGGCTCATCCCCACCGCCGAAGTCTCGCTCACCAATCTCGTCCGCGAATCCATTC TCGACGAGAAAGAGCTGCCGATGCGGCTGACGGCGCTGACGCCGTGTTTCCGCGCGGAGGCGGGGGCTGCGGGGCGGGAT ACGCGCGGGATGATCCGGCAGCATCAGTTCACCAAGGTGGAGCTGGTGTCGATCACCACGCCGGAGCAGTCCAAGGACGA GCACGAGCGGATGTTGAGCTGCGCCGAGGAAGTGCTGCGCCGGCTCGGGCTGCACTACCGCGTCATGACGCTGTGCACCG GCGACATGGGGTTTGCGTCGCAGAAGACCTACGACATCGAAGTCTGGATGCCGGGGCAGGGCGAGGGCGGGGCTTACCGC GAAATCTCGTCGTGCTCGGTGTGCGGCGACTTCCAGGCCCGCCGGATGGATGCGCGCTCGCGCGGCCCGGATGGCAAGCC GCGCTTCGTCCACACGCTGAACGGCTCCGGCACCGCGGTCGGCCGCGCGTTGATCGCGGTGATCGAGAACTATCAGCAGG AGGACGGCTCGATCGCCGTGCCCGACGCGCTGCAGCCCTATATGGGCGGGCTGAAAGTGATCGCGAAGTAA Protein sequence : MHDIKAIRDNPQAFDAAFTRRGLAPIADSLIKLDETRRAAILESEKAQARRNAASKEIGDAKKAKDNARADALMAEVAEL KTTMPALEAAVKEADEALKKALSEIPNLPLDEVPEGADEHGNVDHHRFGAKRDYAFTPKAHYDLGEALGMMDFEAAAKIS GARFVVLKKGLARLERAIGQFFLDVHTGEHGYTEVNPPLLVRDDAMFGTAQLPKFREDQFQTVTEEVRRRTIVEFVSSAM KLGASATDAGGSEFARQLANEELVDFSYAKMPERFWLIPTAEVSLTNLVRESILDEKELPMRLTALTPCFRAEAGAAGRD TRGMIRQHQFTKVELVSITTPEQSKDEHERMLSCAEEVLRRLGLHYRVMTLCTGDMGFASQKTYDIEVWMPGQGEGGAYR EISSCSVCGDFQARRMDARSRGPDGKPRFVHTLNGSGTAVGRALIAVIENYQQEDGSIAVPDALQPYMGGLKVIAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-83 | 46 |
