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Name : RPB_1954 (RPB_1954) Accession : YP_485573.1 Strain : Rhodopseudomonas palustris HaA2 Genome accession: NC_007778 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 2220611 - 2222551 bp Length : 1941 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAATATCCGCTCCAATCCCGACACCACGCGTCCCGCCGTCACCACCGGCGGCCTGCCCTCCTCGCGCAAGATCTATGC TGTGCCCGCCACCGCGCCGGATCTGCGCGTGCCGCTGCGCGAGATCATGCTGAGCGAAGGCGCCGGCGAGCCGAACCTGC CGGTGTACGACACCTCGGGCCCCTACACCGATCCCGGCGTCACCATCGACGTCAACAAGGGCCTGTCGCGCGCCCGCACG GAGTGGGTCAAGCAGCGCGGCGGCGTCGAGCAATATGAAGGCCGCGACATCAAGCCGGAAGACAACGGCAATGTCGGCGC AGCCCATGCGGCGAAGTCGTTCACCGCGCATCACCAGCCGCTGCGCGGCGTCGGCGACGCGCCGATCACGCAATACGAAT TCGCCCGCAAGGGGATCATCACCAAGGAGATGATCTACGTCGCCGAGCGCGAGAATCTCGGCCGCAAGCAGCAACTGGAG CGCGCCGAAGCCGCGCTGGCCGACGGTGAAAGCTTCGGCGCCGCGGTGCCGGCGTTCATCACCCCGGAATTCGTCCGCGA CGAGATCGCGCGCGGCCGCGCCATCATCCCGGCCAACATCAATCACGGCGAACTCGAGCCGATGATCATCGGCCGCAACT TCCTCACCAAGATCAACGCCAACATCGGCAACTCGGCGGTGACCTCGTCGGTCGAGGAGGAAGTCGACAAGATGGTGTGG GCGATCCGCTGGGGCGCCGACACCGTGATGGACCTCTCCACCGGCCGCAACATCCACACCACCCGCGAATGGATTTTGCG CAACTCGCCGGTCCCGATCGGCACCGTACCGATCTATCAGGCGCTGGAGAAGTGCGACGGCGATCCGGTCAAGCTCACCT GGGAGCTGTACAAGGACACGCTGATCGAGCAGGCCGAACAGGGCGTCGATTACTTCACGATCCACGCCGGCGTGCGGCTG CAATACATCCACCTCACCGCCGATCGCGTCACGGGCATCGTTTCCCGTGGCGGATCGATCATGGCGAAGTGGTGCCTGGC GCATCACCAGGAGAGCTTCCTCTACACGCATTTCGACGAGATCTGCGACCTGATGCGGAAATACGACGTGTCGTTCTCAT TGGGCGACGGGCTGCGCCCGGGCTCGATCGCCGACGCCAACGACCGCGCGCAATTCGCCGAACTGGAGACGCTCGGCGAA CTCACCAAGATCGCCTGGGCCAAGGGCTGCCAGGTGATGATCGAAGGCCCCGGCCACGTGCCGCTGCACAAGATCAAGAT CAACATGGACAAGCAGCTCAAGGAATGCGGCGAGGCGCCGTTCTATACGCTCGGCCCGCTGACCACCGACATCGCGCCGG GCTATGATCACATCACCTCCGGCATTGGCGCCGCGATGATCGGCTGGTTCGGCTGCGCGATGCTGTGCTACGTCACGCCG AAGGAACATCTCGGCCTGCCCGACCGCAACGACGTCAAGACCGGCGTGATCACCTACAAGATCGCCGCCCACGCCGCCGA CCTCGGCAAGGGCCACCCCGCAGCCCAGTTGCGCGACGACGCGCTGTCCCGCGCCCGCTTCGACTTCCGCTGGCAGGACC AATTCAACCTCGGCCTCGACCCGGATACGGCGAAAGCCTTCCACGACGAAACCCTGCCCAAGGAAGCCCACAAGGTCGCG CATTTCTGCTCGATGTGCGGCCCGAAATTCTGCTCGATGAAGATCACGCAAGATGTGCGCGACTACGCGGCGGGATTGGG CGACAACGAGAAGGCGGCGCTGAACCTCGCCGGCGCCGGCTCGTTCGGCAGCGTCGGCATGACGATGTCCGGCGTCATCG AAGACGGCATGGCGCAGATGAGCGAGAAGTTTCGGGATATGGGGGAGAAGCTGTATCTCGATGCGGAGAAGGTGAAGGAG AGCAACAAGGCGCTGTCGTAG Protein sequence : MNIRSNPDTTRPAVTTGGLPSSRKIYAVPATAPDLRVPLREIMLSEGAGEPNLPVYDTSGPYTDPGVTIDVNKGLSRART EWVKQRGGVEQYEGRDIKPEDNGNVGAAHAAKSFTAHHQPLRGVGDAPITQYEFARKGIITKEMIYVAERENLGRKQQLE RAEAALADGESFGAAVPAFITPEFVRDEIARGRAIIPANINHGELEPMIIGRNFLTKINANIGNSAVTSSVEEEVDKMVW AIRWGADTVMDLSTGRNIHTTREWILRNSPVPIGTVPIYQALEKCDGDPVKLTWELYKDTLIEQAEQGVDYFTIHAGVRL QYIHLTADRVTGIVSRGGSIMAKWCLAHHQESFLYTHFDEICDLMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGE LTKIAWAKGCQVMIEGPGHVPLHKIKINMDKQLKECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTP KEHLGLPDRNDVKTGVITYKIAAHAADLGKGHPAAQLRDDALSRARFDFRWQDQFNLGLDPDTAKAFHDETLPKEAHKVA HFCSMCGPKFCSMKITQDVRDYAAGLGDNEKAALNLAGAGSFGSVGMTMSGVIEDGMAQMSEKFRDMGEKLYLDAEKVKE SNKALS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 66 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 65 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 65 |
