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Name : RPB_1774 (RPB_1774) Accession : YP_485393.1 Strain : Rhodopseudomonas palustris HaA2 Genome accession: NC_007778 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 2034842 - 2036479 bp Length : 1638 bp Strand : + Note : - DNA sequence : ATGGACGCCCTCAACCAGCCTCTGCTCTCCGTCGACGATCTCTCGGTGGCGTTCCATCAGCAGAGCGGCACCACCACCGC GGTCGATCGCATCTCGTATCAGATCAGGCGCGGCGAGTGCGTGGCATTGGTCGGCGAGTCCGGGTCGGGCAAATCGGTCA GCGCGCTGTCGATCCTGAAGCTGCTGCCATATCCGACGGCGTCGCATCCGACCGGGCAGATCCGGTTCAAGGGCCGCGAG CTGCTCGGCATGTCGGAGAACGACATCCGCGCCATCCGCGGCAACGAGATTTCGATCATCTTCCAGGAGCCGATGACCTC GCTCAATCCGCTGCACACGATCGAGGCGCAGATCGGCGAGATCCTGCAACTGCACGGCGGCCCGCGCGGCGCCAAGGCGC GGGCGCGCATTCTGGAATTGCTGACGCAGGTCGGCATCCCCGAGCCGGAAACGCGGCTCGCCAGCTACCCGCATCAACTC TCGGGCGGCCAGCGCCAGCGCGTGATGATCGCGATGGCGCTCGCCAACGAGCCGGACCTCCTGATCGCCGACGAGCCGAC CACCGCGCTCGACGTCACCGTGCAGGCACAGATCCTGGCGCTGCTCGCCGACATCCGTGCCCGGCTCGGCATGAGCCTGT TGTTCATTACCCATGATCTCGGCATCGTGCGGCGCATCGCCGACGTCGTCTGCGTGATGAACAACGGCAAGATCGTCGAA CAGGGCCCGGTCGAGCAGGTGTTCACCGCACCACAGCACGCCTACACCCGCGCGCTGCTCGCCGCCGAGCCGAAGCCCGA TCCCGCGCCGCCGCGGCCCGAGCAGCCGGTGGTGATCTCGACCGACAATCTCAAGGTCTGGTTTCCGATCAAGCGCGGGC TGATGCGCAAGACCGTCGGCCACATCAAGGCGGTCGACGGCGTCACGCTCGAAGTGCGCAAGGGCGAGACGCTCGGCGTG GTCGGCGAGTCCGGCTCCGGCAAGACCACCCTCGGTCTGGCGCTGCTGCGGCTGATCTCGTCCGAAGGTCCAATCGTTTT TCTCAGCAGCGATATCCAGGGCCTGAAGTTCAAGGAGATGCTGCCGTTCCGCCGCGACATGCAAATCGTGTTTCAGGATC CGTTCGGCGCGCTCAGCCCGCGCATGGCGATCGGTGATATCGTCGCCGAGGGCCTCAGCGTGCATCAGCCGCATCTGTCG GAAGACGAGCGCGAGGCGCGGGTGATCAAGGCGCTGACCGACGTCGGCCTGGATCCGGCGACGCGCTTCCGCTATCCGCA CGAATTCTCCGGCGGCCAGCGCCAGCGCATCAGCATCGCGCGTGCGGTGGTACTGGAGCCGAATTTCGTGGTGCTCGACG AGCCGACCAGCGCGCTCGACATGCTGTTCCAGGCGCAGATGGTCGATCTGTTGCGCGAGCTGCAGCGCAAGCGCGATCTG ACCTACATGTTCATCTCGCACGATCTGCGCGTGGTGGCGTCACTCGCCAGTCATCTGATCGTCATGAAGCAGGGCAAGGT GGTCGAGGAAGGTCCTGCGGCGGAGCTGTTCAAACACCCGAAGACCGACTATACGCGTGCGCTGTTTGCCGCCGCGTTCC GGCTCGAGACCGCTCCGGGCGGCGGCGCCGCGCCATAG Protein sequence : MDALNQPLLSVDDLSVAFHQQSGTTTAVDRISYQIRRGECVALVGESGSGKSVSALSILKLLPYPTASHPTGQIRFKGRE LLGMSENDIRAIRGNEISIIFQEPMTSLNPLHTIEAQIGEILQLHGGPRGAKARARILELLTQVGIPEPETRLASYPHQL SGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILALLADIRARLGMSLLFITHDLGIVRRIADVVCVMNNGKIVE QGPVEQVFTAPQHAYTRALLAAEPKPDPAPPRPEQPVVISTDNLKVWFPIKRGLMRKTVGHIKAVDGVTLEVRKGETLGV VGESGSGKTTLGLALLRLISSEGPIVFLSSDIQGLKFKEMLPFRRDMQIVFQDPFGALSPRMAIGDIVAEGLSVHQPHLS EDEREARVIKALTDVGLDPATRFRYPHEFSGGQRQRISIARAVVLEPNFVVLDEPTSALDMLFQAQMVDLLRELQRKRDL TYMFISHDLRVVASLASHLIVMKQGKVVEEGPAAELFKHPKTDYTRALFAAAFRLETAPGGGAAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-81 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-81 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-81 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-81 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-93 | 43 |
