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Name : RPB_1648 (RPB_1648) Accession : YP_485267.1 Strain : Rhodopseudomonas palustris HaA2 Genome accession: NC_007778 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 1876933 - 1878549 bp Length : 1617 bp Strand : - Note : - DNA sequence : ATGTCCGCAGCCGCCGTATCGATCAGGAACCTGAAGCTGGCGCTGCCAGCAGGCGGCGATCGCGCGCACGCCGTCGATGG CGTGTCGTTCGATCTCACCGCCGGCAAGATCCTCTGCGTCGTCGGTGAATCCGGCTCCGGCAAGTCGATGTGCGCGCACG CGCTGATGGGGCTGCTACCCGACAGCGTGATCGCCGAGGCCGGCGAGATCGTGTTCGAGGGACAGAACCTCCTGACGCTC GGCGACAGCGCCTGGCTCGCTTTGCGCGGCCGTCACATCGCCATGGTGTTCCAGGAGCCGATGACGGCGCTCAATCCCCT GATGCGGATCGGCGACCAGATCGCCGAGATGTTCGAGGCGCACAATCTGCTGACGCCGAAACAGCGACGGCAGAAGGCCG TCGAGCTGCTGCGCGAAGTCGGCCTGCCTAACCCCGAGCAGGCGACGCGCGCCTATCCTCACCAACTGTCCGGCGGCCAG CGCCAGCGCGCGATGATCGCGATGGCGCTCGCGCTTGAGCCGGCCGTGCTGGTCGCCGACGAGCCGACGACGGCGCTCGA CGTCACCACGCAAGCGCAGATCCTCAAGCTGATCCGCGACCTGCAGCGCCGCCGCAACATGGCGGTGATGTTCATCACCC ACGATTTCGGCGTCGTCGCCGACATCGCCGATCGCGTCGTCGTGCTTCAGCACGGCAAGGTGGTCGAGCAAGGCGCGGCG GACGACGTGCTGCTGCGCCCGCAGCATCCCTATACGCAGGCCCTGCTCGCCGCGGTGCCGACGATGCATCCGCCGCCGCG GGCCGCCCTGCTTGACCGTCGCAAGGCGGTCGAGGTCGTCGGCCTCGACAAGACGTATATCAGCGGAGGAGGCTGGTTCC GCCCGGTGCGCAGCGTTCAGGCCGCGAACGGGGTGAGTTTCGATATCCTTCAGGGCGAGACACTCGGTCTCGTCGGCGAA TCCGGCTCGGGCAAGTCGTCGATCGCGCGTCTCGTCATGCGCCTGATCGAGCCTGACCGCGGCACGGTCCGTCTCGGCGA CACCGATCTCACGCTGGCCGGCGGAAAGGAGCTGCGCGAGCAGCGCCGGCGAATCCAGATGATCTTTCAGGACCCGTTCG CCTCGCTCAATCCGCGCCGCAAGGTCGGCCATATCATCACCGACGGGCCGATTGCGCACGGCGCGGATCCGGCCGCCGCG CGGCTGCGCGCCGGCGAACTGCTCGGCCTGGTCGGCCTCAACGCGAGCGCGATGGAGCGGTTTCCGCACGAATTCTCCGG CGGCCAGCGCCAACGCATCGGAATCGCCAGGGCACTGGCGCTCGATCCCGAAGTTCTGGTCGCAGACGAGGCGGTGTCCG CGCTCGACGTGTCGGTGCAAGCGCAGGTGCTGGATTTGCTCGAGGATCTCAAGACACGGCTCGGCCTTTCGATGCTGTTC ATCACCCACGACCTCCGGGTCGCCGCGCAGATCTGCGATCGCATCGCAGTGATGCAGCGCGGCAGCATCGTTGAAATGCG GCCGACCGCCGCGCTGTTTTCCGCTCCGGAGCATCCCTATACGCGCGAGCTGCTCGCCGCGGTGCCCGGCCAGACAGCCG CTTCCAAGGCCGCCTGA Protein sequence : MSAAAVSIRNLKLALPAGGDRAHAVDGVSFDLTAGKILCVVGESGSGKSMCAHALMGLLPDSVIAEAGEIVFEGQNLLTL GDSAWLALRGRHIAMVFQEPMTALNPLMRIGDQIAEMFEAHNLLTPKQRRQKAVELLREVGLPNPEQATRAYPHQLSGGQ RQRAMIAMALALEPAVLVADEPTTALDVTTQAQILKLIRDLQRRRNMAVMFITHDFGVVADIADRVVVLQHGKVVEQGAA DDVLLRPQHPYTQALLAAVPTMHPPPRAALLDRRKAVEVVGLDKTYISGGGWFRPVRSVQAANGVSFDILQGETLGLVGE SGSGKSSIARLVMRLIEPDRGTVRLGDTDLTLAGGKELREQRRRIQMIFQDPFASLNPRRKVGHIITDGPIAHGADPAAA RLRAGELLGLVGLNASAMERFPHEFSGGQRQRIGIARALALDPEVLVADEAVSALDVSVQAQVLDLLEDLKTRLGLSMLF ITHDLRVAAQICDRIAVMQRGSIVEMRPTAALFSAPEHPYTRELLAAVPGQTAASKAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-82 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-82 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 5e-82 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-82 | 42 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-98 | 42 |
