Name : RPB_1553 (RPB_1553) Accession : YP_485174.1 Strain : Rhodopseudomonas palustris HaA2 Genome accession: NC_007778 Putative virulence/resistance : Virulence Product : UDP-glucose/GDP-mannose dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 1750581 - 1751852 bp Length : 1272 bp Strand : + Note : - DNA sequence : ATGCGGAAGATTGCGGTCGTCGGTCTCGGATATGTGGGCTTGCCAGTTGCTATTGGATTTGCCCGTTCGTACCAGGTGGT CGGCTTCGATGTCGATCGCGTGCGGATCTCCGAGCTGAATGAAGGCTTCGACCGAACGCGCGAGGTCGAGCCGGACGCGC TGCGCGGCGCCTCGATCAAGTTCACCAGTGTCGTCGCCGAATTGTCGGGATGCGATTTCTACATTGTGGCGGTCCCCACG CCGCTCGATGACGCGCGTCGGCCCGACCTCGGTGCGATGTTGTCCGCCTCGCGCGCGGTGGGGTCGGTCCTGAAGAAAAA CGATATCGTCGTCTACGAGTCGACCGTCTATCCGGGCGCAGTCGAAGAAGAGTGTCTTCCCGTTCTCGAGCAGGCGTCGG GACTCCTGGCGGGAGTCGACTTCAAGGTCGGATACTCGCCGGAGCGGATCAATCCCGGCGACAAGAACCACAGGTTCGAA ACCATCACCAAAGTCGTCTCGGCCCAGGACGCCGAATCTCTCGACATCGTCGCCGACGTCTATGGTTCGGTCGTCACCGC CGGCATCTACCGGGCGCCCTCGATCAAGGTCGCGGAAGCCGCCAAGGTCATCGAGAATACTCAGCGCGACCTCAACATCG CTTTCATGAACGAGCTGGCTCTGATCTTCCAGTCTCTGGAAATCGATACCGATGACGTTCTTGCGGCGGCGAGAACGAAA TGGAATTTCCTGCCGTTTCAGCCCGGACTGGTGGGTGGACACTGCATCGGCGTGGACCCTTACTATCTGACCTTCCGGGC GGAAAAAGCAGGCTATCATCCTGAAGTCATCCTGGCGGGTCGCCGGATCAACGACGCCATGGGAGCGGAGATTGCCCGTC AGTGCATCCGCCGGATGATGCGGTGCCGATATCGGAGCGAAACCGTGACGATCCTCGGCCTGACGTTCAAGGAGAACGTT CCCGACATCCGCAACACCAAAGTGGTGGACATCGTGCGTGAGCTGGAATCGTTCGGCGTTGCAGTTCAGATCTGCGATCC TTGGGCGAACCCCGGCGACGCTTCGCGGGAGTACGGGATCGAGCCGGTCGATCTGGACAAGCTGCAGCCGGCCGACGCCG TGATCGTTGCTGTTGCTCACGACGATTTTCTGCAACTCGGGTGGCCGCGGATCCAGACATTGCTTCACGGCGGCAAGGGC ATCGTGTTCGACGTCAAGGCCAAATTGGATCGAAGCGCAAAGCCCGCCGATATCGAGCTGCTGCGGCTCTAA Protein sequence : MRKIAVVGLGYVGLPVAIGFARSYQVVGFDVDRVRISELNEGFDRTREVEPDALRGASIKFTSVVAELSGCDFYIVAVPT PLDDARRPDLGAMLSASRAVGSVLKKNDIVVYESTVYPGAVEEECLPVLEQASGLLAGVDFKVGYSPERINPGDKNHRFE TITKVVSAQDAESLDIVADVYGSVVTAGIYRAPSIKVAEAAKVIENTQRDLNIAFMNELALIFQSLEIDTDDVLAAARTK WNFLPFQPGLVGGHCIGVDPYYLTFRAEKAGYHPEVILAGRRINDAMGAEIARQCIRRMMRCRYRSETVTILGLTFKENV PDIRNTKVVDIVRELESFGVAVQICDPWANPGDASREYGIEPVDLDKLQPADAVIVAVAHDDFLQLGWPRIQTLLHGGKG IVFDVKAKLDRSAKPADIELLRL |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-104 | 60 |
tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-99 | 55 |
tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-99 | 55 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
RPB_1553 | YP_485174.1 | UDP-glucose/GDP-mannose dehydrogenase | VFG0431 | Protein | 9e-100 | 55 |