Gene Information

Name : Francci3_0812 (Francci3_0812)
Accession : YP_479925.1
Strain : Frankia sp. CcI3
Genome accession: NC_007777
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 943213 - 943899 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGACCGTCCTGATCGAGGCCCGCGATCTCGCGCTCACTTTCGGTGAGACCCCTGCCCTGCGTGGCGCCAGCCTGACCGT
CGATGCCGGCGAGGTGCTCGCCATCATGGGCCCGAGCGGTTCCGGCAAGTCCACCTTGCTGCACTGTCTGGCCGGCATCC
TCACCCCCGACTCGGGGGAGGTGCACTTCAACGGCCGACGAATCGACACCATGAACGAGGCCCGGCGCAGCGAACTGCGC
CGGCGTACCTTCGGCTTCGTCTTCCAGTTTGGTCAGCTCGTCCCCGAGCTGACCGCCGAGGAGAACGTCGCTCTGCCATT
GCTGTTCGGCGGCACCAGCCGGGCAGGAGCACTCGCCCAGGCCCGGCCCTGGTTCGCCCGGCTCGGCCTGGACGGCATGC
AGCGGCGCCGTTCCGGCGAACTGTCGGGAGGCCAGGCGCAGCGCATCGCGCTCGCCCGTGGCCTGGTCGCCCGGCCCCAG
GTGCTCTTCGCCGACGAGCCGACCGGCGCACTCGACTCGCTCACCGGCGAACAGGTGATGGAACTGTTGGTGGGTACGGC
CCGCGAGCAGGGCACGACCGTCATCCTGGTCACCCACGAGCCCCGGGTCGCCGCCTACGCCGACCGGGAGGCCGTCGTCC
GGGACGGCAGGGCCAGCACATTCGCGGCCGAACGGATCGCCCCGTGA

Protein sequence : 
MTVLIEARDLALTFGETPALRGASLTVDAGEVLAIMGPSGSGKSTLLHCLAGILTPDSGEVHFNGRRIDTMNEARRSELR
RRTFGFVFQFGQLVPELTAEENVALPLLFGGTSRAGALAQARPWFARLGLDGMQRRRSGELSGGQAQRIALARGLVARPQ
VLFADEPTGALDSLTGEQVMELLVGTAREQGTTVILVTHEPRVAAYADREAVVRDGRASTFAAERIAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-33 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Francci3_0812 YP_479925.1 ABC transporter NC_012469.1.7686878. Protein 2e-38 46
Francci3_0812 YP_479925.1 ABC transporter NC_008702.1.4606598. Protein 2e-31 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Francci3_0812 YP_479925.1 ABC transporter VFG2059 Protein 1e-18 43