|
Name : deoA (Francci3_0685) Accession : YP_479798.1 Strain : Frankia sp. CcI3 Genome accession: NC_007777 Putative virulence/resistance : Unknown Product : thymidine phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.4 Position : 783059 - 784363 bp Length : 1305 bp Strand : + Note : Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate DNA sequence : GTGAGCGGAAGCTTCGACGTCGTCGATCTGATCCGGGCCAAGCGGGACGGTCGACCCGTCGATCCCCGGGCCGTCGACTG GCTCGTCGACGCCTACACCCGGGGTCTGGTTGCCGACGAGCAGATGTCGGCGTACCTGATGGCGGTGGTGTGGCGCGGGA TGACTCCCGCCGAGCTGGACCGCTGGACCGCCGCAATGATCGACAGTGGGGAGCGCCTGGATCTGACCGGTGTGGGACGT CCCACCGTCGACAAACACTCCACCGGAGGGGTCGGCGACAAGGTCTCGCTCGTGCTGGTGCCGCTGGTCGCCGCCTGTGG GGCCGCGGTCCCACAGCTCGCCGGGCGGGGGCTCGGTCACACCGGTGGAACGCTGGACAAGATGGAGGCGATCCCCGGCT GGCGGGCGGATCTGTCGGCCGCCCGGATGCGTGAGCTCCTCGCCGAGGTGGGTGCGGTGATCGCCGCCGCGGGTGCCGGC CTCGCCCCGGCCGACCGCCGGCTCTACGCGCTGCGGGACGTCACCGGAACCGTCGAGTCGATCCCGCTCATCGCATCGTC GATCATGAGCAAGAAGATCGCCGAGGGCACGTCGGCGCTGGTCCTGGACGTCAAGGTCGGCTCCGGGGCCTTCATGACGT CGGTGGATGAGGCCCGTGAGCTCGCCCGGACGATGGTTCGGATCGGCGTTGCCGCCGGGGTCCGCACCGAGGCCCTGCTG ACCGGGATGGACCATCCCCTCGGCCGGACCGCCGGGCATGCGCTGGAGGTGGCCGAGGCCGTGGAGACCCTCCGTGGTGG TGGGCCGGCGGATCTGGTGGAGGTCACCGTCGCGCTGGCCAGGGTGATGATCGACCTCGTCGCCGCCGAACTCGGCCACC GGTCCGGTGCTCTTCATGATCCCGCGCAGGTACTGGCTGCCGGGGACGCTTTTGCGGTGTGGCGGGCGATGGTCGCGGCC CAGGGCGGCGATCCGGACGCGCCGCTTCCGGCGGCGAGCCATGTCGAGACCGTCCCCGCGCCGGCGACCGGCCATCTCCA CCGCCTGGACGCCCGAGCGGTCGGCCTGGCGGCCTGGCGGCTTGGCGCGGGCCGGGTCCGCAAGGAGGACGCGGTCTCCG CGACGGCGGGCGTGCGGTGGCGGGTGGGAATCGGTGACCCGGTCACGGCCGGCGAGCCGTTGCTGGAACTGCACACCGAT GACCCGGCCAGCGTCGAGCGGGCCCGGGAGGCCCTGGCGGGAGCGGTGGAGGTCGCCGCGACGCCGCCCCCGAGCACACC GCTTGTCCTCGATCACATCAGCTGA Protein sequence : MSGSFDVVDLIRAKRDGRPVDPRAVDWLVDAYTRGLVADEQMSAYLMAVVWRGMTPAELDRWTAAMIDSGERLDLTGVGR PTVDKHSTGGVGDKVSLVLVPLVAACGAAVPQLAGRGLGHTGGTLDKMEAIPGWRADLSAARMRELLAEVGAVIAAAGAG LAPADRRLYALRDVTGTVESIPLIASSIMSKKIAEGTSALVLDVKVGSGAFMTSVDEARELARTMVRIGVAAGVRTEALL TGMDHPLGRTAGHALEVAEAVETLRGGGPADLVEVTVALARVMIDLVAAELGHRSGALHDPAQVLAAGDAFAVWRAMVAA QGGDPDAPLPAASHVETVPAPATGHLHRLDARAVGLAAWRLGAGRVRKEDAVSATAGVRWRVGIGDPVTAGEPLLELHTD DPASVERAREALAGAVEVAATPPPSTPLVLDHIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 4e-101 | 53 |
