Gene Information

Name : Francci3_4356 (Francci3_4356)
Accession : YP_483431.1
Strain : Frankia sp. CcI3
Genome accession: NC_007777
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 5201861 - 5204470 bp
Length : 2610 bp
Strand : +
Note : -

DNA sequence :
ATGAACGCTGAACGCCTCACCGCCCGGTCGCAGGAGGCACTCTCCGCAGCGATCAGTCGAGCCACCGCCGACGGGTCACC
CCTCGTCGACCCCCTCCACCTGCTCAACGCCCTGCTCGAAGCGTCCGACGGGGTCGGCGCGGCACTGCTGGCGTCCGCGG
GCACCTCGGTCGACACGGTGCGCTCCCGAGCCGAGGCCGCGGTGACGCGGCTGCCCCGCGCGACGGGCCTGAGCGTGTCC
CCGCCGCAGCTGTCCCGCCAGCTCATCGCGGTGCTGAACAACGCCGAGCGGCAGGCCGGTCAGCTGGGTGACGAATACAC
TTCGGTCGAGCATCTGGTCGTGGCACTCGCCGAGGAGGGGGGCGAGGCCGGGCGGATCCTCACCTCCGCCGGCGCCACGC
CCGACGCGCTGCGCGGCGCCTTCGAGAAGGTGCGCGGCGGCGCCCGGCGGGTGACCAGCCGGGACCCGGAGGGCTCCTAC
CGCGCGTTGGAGAAGTACTCCATCGACCTCACCGAGCGTGCGCAGCAGGGCAAGCTGGACCCGGTGATCGGCCGCGACGC
CGAGATCCGCCGCGTCATCCAGGTGCTGTCGCGGCGGACGAAGAACAACCCGGTCCTCATCGGCGAGCCCGGGGTCGGCA
AGACGGCCATCGTCGAAGGGCTCGCGCTGCGGGTCGTCGCGGGTGACGTGCCCGAGTCGCTGCGCGGCCGGCGCATCGTC
TCGCTCGACCTCGGTTCGATGGTTGCCGGCTCCAAGCTGCGCGGCGAGTTCGAGGAGCGGCTGACCTCTGTCCTCAACGA
GATCCGCGAGGCCGAGGGTCAGATCATCACCTTCATCGACGAGCTGCACACCGTCGTCGGCGCCGGTGCGGCGGAAGGAG
CGATGGACGCCGGCAACATGCTCAAGCCGATGCTCGCCCGCGGCGAGCTGCGCATGATCGGCGCCACCACCCTGGAGGAG
TACCGCACCCGGATCGAGAAGGACCCGGCGCTGGAGCGTCGCTTCCAGCCGGTCCTCGTCGGCGAGCCGACGGTCGAGGA
CACCATCGGCATCCTGCGCGGGCTCAAGGAACGCTACGAGGTGCACCACGGCGTGCGCATCACCGACACCGCGCTGGTCG
CCGCGGCCACCCTGTCCGACCGCTACGTCACCGCGCGCTTCCTGCCGGACAAGGCGATCGACCTGGTCGACGAGGCCGCG
TCCCGGCTCCGCATGGAGATCGACAGCCGGCCGGTGGCGATCGACGAACTCGAACGCGCCGTGCGCCGCCTGGAGATCGA
GGACATGGCGCTGTCCAAGGAGAACGACGAGGCCTCCCGCGAGCGGCGGGGGCGCCTGCAGCGCGAGCTCGCCGACCGGC
GTGAGGAGCTGTCGAGCCTGACGGCCCGCTGGCACCGGGAGAAGGATTCGATCTCCGAGGTTCAGAAGATCAAGGAGGAG
CTGGAGAACGCGCGGCGCGCCGTGGAGCTCGCCGAGCGCGACCTCGACCTCGCCAAGGCCGGGGAGCTGCGGTACGGCAC
CATCCCGACGTTGGAGAAGCGGCTGTCGGCGGCAACCGACGCGCTGGCCGGCGCGGACTCCCCCGGTGGGGCGATGCTCA
ACGAGGAGGTCGGCCCGGACGACGTCGCCGAGGTCGTCGCCGCCTGGACCGGGATCCCGGCCGGTCGCCTCCTCGAAGGC
GAGACGGCGAAGCTGCTGCGTATGGAGTCCGCGCTGCACGCGCGGGTCATCGGCCAGGACGACGCGGTGCGGGCCGTCTC
CGACGCGGTCCGCCGGGCCAGGGCCGGGATCGCCGACCCGGACCGGCCGACCGGCTCCTTCCTCTTCCTCGGGCCCACCG
GGGTCGGGAAGACCGAGCTCGCGAAGGCGCTCGCCGATTTCCTCTTCGACGACGAGCGGGCGATCGTGCGCATCGACATG
AGCGAGTATGCCGAGAAGCACTCGGTGGCCCGTCTGATCGGCGCCCCACCCGGGTACGTCGGGTTCGAGTCCGGCGGTCA
GCTCACCGAGGCGATCCGCCGCCGGCCATACAGTGTCATCCTGTTGGACGAGGTCGAGAAGGCCCATCCGGACGTCTTTG
ACGTCCTGCTGCAGGTTCTCGACGACGGGCGGCTCACCGACGGCCAGGGCCGCACGGTGGACTTCCGCAACACGATCCTC
ATCCTGACCTCGAACCTCGGGTCGCAGTTCATCGCGGACCCCACGCTCAGCCCGCAGGTGCGCCGCGAGTCGGTGATGGT
CGCCGTGCGCGACGCCTTCAAGCCGGAGTTCCTCAACCGCCTCGACGACGTCCTCGTCTTCGACCAGCTGGGCCGGGACG
AGCTGACCCGCATCGTCGATCTCCAGCTCGATCGGCTGCGGGCCCGGCTGCTCGACCGGAGGATCACCCTCAACGTCACC
GACGCCGCCAAGGGATGGCTCTCCGACGTCGGCTACGACCCGGTGTTCGGGGCCCGTCCGCTGCGGCGGCTGGTCCAGAC
GGCGATCGGCGACCAGCTCGCCAAGGAACTGCTCGGCGGGCAGATCCGGGACGGCGACGAGGTGCTCGTCAACACCGCGC
CGGACCGCTCGGGTCTGACGGTCAAGGCCGCCACCGTCAAGTCCCTCTGA

Protein sequence :
MNAERLTARSQEALSAAISRATADGSPLVDPLHLLNALLEASDGVGAALLASAGTSVDTVRSRAEAAVTRLPRATGLSVS
PPQLSRQLIAVLNNAERQAGQLGDEYTSVEHLVVALAEEGGEAGRILTSAGATPDALRGAFEKVRGGARRVTSRDPEGSY
RALEKYSIDLTERAQQGKLDPVIGRDAEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRVVAGDVPESLRGRRIV
SLDLGSMVAGSKLRGEFEERLTSVLNEIREAEGQIITFIDELHTVVGAGAAEGAMDAGNMLKPMLARGELRMIGATTLEE
YRTRIEKDPALERRFQPVLVGEPTVEDTIGILRGLKERYEVHHGVRITDTALVAAATLSDRYVTARFLPDKAIDLVDEAA
SRLRMEIDSRPVAIDELERAVRRLEIEDMALSKENDEASRERRGRLQRELADRREELSSLTARWHREKDSISEVQKIKEE
LENARRAVELAERDLDLAKAGELRYGTIPTLEKRLSAATDALAGADSPGGAMLNEEVGPDDVAEVVAAWTGIPAGRLLEG
ETAKLLRMESALHARVIGQDDAVRAVSDAVRRARAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAIVRIDM
SEYAEKHSVARLIGAPPGYVGFESGGQLTEAIRRRPYSVILLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTIL
ILTSNLGSQFIADPTLSPQVRRESVMVAVRDAFKPEFLNRLDDVLVFDQLGRDELTRIVDLQLDRLRARLLDRRITLNVT
DAAKGWLSDVGYDPVFGARPLRRLVQTAIGDQLAKELLGGQIRDGDEVLVNTAPDRSGLTVKAATVKSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-96 42
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 8e-97 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 6e-97 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Francci3_4356 YP_483431.1 ATPase VFG2084 Protein 6e-102 43