Gene Information

Name : Francci3_4240 (Francci3_4240)
Accession : YP_483315.1
Strain : Frankia sp. CcI3
Genome accession: NC_007777
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 5058636 - 5059493 bp
Length : 858 bp
Strand : -
Note : -

DNA sequence : 
GTGACGGGCCTTCGCCTGGAAGGTCTGGGTGTCGTCGCCGACGGGGTACAGATCGTGCGCGACCTGACGGTCGGCTGTCC
CCCCGGCGCCTTCGTCGGCCTGGTCGGTCCGAACGGCAGCGGGAAGTCGACCGTGCTGAAGACGGTCTACCGGGTGGTGC
GGCCGACGTCCGGTGCGGTGCTGCTCGACGGAACTGACCTGGTCAGGGACCTCACCCCGCGCCAGTCGGCGCGGCGGGTC
GCGGCCCTGGCGCAGGAAAGCCCCGATGGCTTTGACTTCACCGTCCTTGAGGTGGTCGCGACCGGGCGGACCCCCCACCA
GAGCGCGTGGAGCCCGACCTCGACCGGGGATCATGAGATCATCTCGGCCGCGCTCGACACCGTGGGCATGGCCGCGCACG
CCGGGCGGGCGTTCGCGTCGCTGTCCGGCGGCGAGAAGCAGCGGGTCCTGCTGGCGCGCGCCCTCGTGCAGGCACCGTCG
GTGCTGATCCTGGACGAGCCGACCAACCATCTGGATATCAGCACCCAGCTGAGCCTGCTGGAGTTGGTGCGCTCACTCGG
GATCACCGTGCTCGCCGCGTTACATGACCTCAACCTCGCGACGGCCTTCTGTGACCGGCTCTATGTCCTGCACGACGGCG
CGGTGATCTGTTCGGGCAAACCGGAGGACGTCCTGACCGCCGACCTCATCGGCCGCGTGTTCGGGGTGCGCGCCGACCGG
AGCGTCCACCCGGTGACCGGCCGCCTCCAGCTCGCTTTCTCCAGTCTTCCCTTCCCCAGCCTGCCTTCTTCCAGCCTGCC
CGGAACAGACGAGCCGGCCCCGGTGGTAGCTGGCGCGGAAATCCCGATAAAGCAATGA

Protein sequence : 
MTGLRLEGLGVVADGVQIVRDLTVGCPPGAFVGLVGPNGSGKSTVLKTVYRVVRPTSGAVLLDGTDLVRDLTPRQSARRV
AALAQESPDGFDFTVLEVVATGRTPHQSAWSPTSTGDHEIISAALDTVGMAAHAGRAFASLSGGEKQRVLLARALVQAPS
VLILDEPTNHLDISTQLSLLELVRSLGITVLAALHDLNLATAFCDRLYVLHDGAVICSGKPEDVLTADLIGRVFGVRADR
SVHPVTGRLQLAFSSLPFPSLPSSSLPGTDEPAPVVAGAEIPIKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-37 41
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 8e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Francci3_4240 YP_483315.1 ABC transporter BAC0164 Protein 1e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Francci3_4240 YP_483315.1 ABC transporter VFG1042 Protein 9e-38 41