|
Name : Francci3_4167 (Francci3_4167) Accession : YP_483244.1 Strain : Frankia sp. CcI3 Genome accession: NC_007777 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3316 EC number : - Position : 4968632 - 4969345 bp Length : 714 bp Strand : + Note : - DNA sequence : GTGATGCGTCGACGTCGTGTCCGTCCACCGGTCCCGACATCGGAGTTCGCCGGGTTCCGGTTCCCACCCGAGGTGATCAT CCTGGCAGTCCGCTGGTACCTGCGGTACGCCTTGTCGTACCGTGACGTCGAGGAACTCCTCGCCGAACGCGGCATCGACG TTGACCACGTCACGGTCTACCGGTGGGTGCGCCGGTTCACCCCGCTGCTTATCGACGCGGCCCGGCCATGCCGGCACACA CCGGGTGATCGTTGGTTCGTCGACGAAACGTATGTGAAGGTCGCTGGACGATGGACCTATCTGTACCGGGCCGTCGACCA GTCCGGCCAGGTCATCGACGTGCTGGCCTCCGAGAAGCGGGATCTCGCCGCGGCCCGCCGGTTCTTTACCCGCGCCCTGT CCCACGGCCGGCGGCCCGTCGAGGTGACCACCGACCGGGCAGCCTTCTACCCACGAGTCCTCGACGAACAGCTCCCCGCC GCTCATCACGTCGACGACCAGTACGCGAACAATCCGATCGAAGCCGACCACGGCCGGTTCAAGGCACGACTACGGCCGAT GCGCGGCCTGAAACGCCTCCGCTCCGCACAGATCATCGGCTCCGGGCACGCGTTCGTGCAGAACATCCGCCGCGGCCACT ACGAACTGGGCGTCGATGCCGACCTCCGGAACCGGCTGACGGCTGCCTTCACCGAACTCACCCTGGCCATCTGA Protein sequence : MMRRRRVRPPVPTSEFAGFRFPPEVIILAVRWYLRYALSYRDVEELLAERGIDVDHVTVYRWVRRFTPLLIDAARPCRHT PGDRWFVDETYVKVAGRWTYLYRAVDQSGQVIDVLASEKRDLAAARRFFTRALSHGRRPVEVTTDRAAFYPRVLDEQLPA AHHVDDQYANNPIEADHGRFKARLRPMRGLKRLRSAQIIGSGHAFVQNIRRGHYELGVDADLRNRLTAAFTELTLAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA6100 | ACN62081.1 | TnpA6100 | Not tested | SGI1 | Protein | 1e-27 | 42 |
| tnpA6100 | ACN81001.1 | transposase | Not tested | AbaR5 | Protein | 2e-27 | 42 |
| tnpA6100 | AGK07018.1 | IS6100 transposase | Not tested | SGI1 | Protein | 2e-28 | 42 |
| tnpA6100 | AGK07076.1 | IS6100 transposase | Not tested | SGI1 | Protein | 2e-28 | 42 |
| tnp6100 | ACX47960.1 | tnp6100 | Not tested | SGI1 | Protein | 2e-28 | 42 |
| tnpA6100 | AGF34993.1 | IS6100 transposase | Not tested | SGI1 | Protein | 1e-27 | 42 |
| tnpA6100 | AGF35032.1 | IS6100 transposase | Not tested | SGI1 | Protein | 1e-27 | 42 |
| tnpA6100 | AGF35067.1 | IS6100 transposase | Not tested | SGI1 | Protein | 1e-27 | 42 |
| tnpA6100 | AGK06937.1 | IS6100 transposase | Not tested | SGI1 | Protein | 1e-27 | 42 |
| tnpA6100 | AGK06983.1 | IS6100 transposase | Not tested | SGI1 | Protein | 1e-27 | 42 |
| tnpA6100 | AGK07042.1 | IS6100 transposase | Not tested | SGI1 | Protein | 1e-27 | 42 |
| tnpA6100 | AGK07113.1 | IS6100 transposase | Not tested | SGI1 | Protein | 1e-27 | 42 |
| tnpA | AAG03007.1 | transposase | Not tested | SGI1 | Protein | 1e-27 | 42 |
| tnp6100 | ACS32049.1 | Tnp6100 | Not tested | SGI2 | Protein | 1e-27 | 42 |
| CDBH8_0916 | YP_005160008.1 | transposase-like protein | Not tested | Not named | Protein | 2e-27 | 42 |
| tnpA | CAJ77056.1 | Transposase | Not tested | AbaR1 | Protein | 1e-27 | 42 |
| unnamed | BAB47638.1 | putative transposase of IS431 | Not tested | Type-III SCCmec | Protein | 1e-21 | 41 |
| unnamed | BAB47648.1 | putative transposase of IS431 | Not tested | Type-III SCCmec | Protein | 1e-21 | 41 |
| unnamed | BAD24828.1 | transposase for IS431 | Not tested | Type-V SCCmec | Protein | 6e-22 | 41 |
| tnp | BAD24823.1 | transposase for IS431 | Not tested | Type-V SCCmec | Protein | 4e-22 | 41 |
| SAPIG0054 | YP_005732864.1 | transposase | Not tested | Type-V SCCmec | Protein | 2e-21 | 41 |
| SE0090 | NP_763645.1 | transposase for IS-like element | Not tested | SCCpbp4 | Protein | 2e-21 | 41 |
| tnp | YP_252034.1 | transposase for IS431mec | Not tested | SCCmec | Protein | 1e-22 | 41 |
