Gene Information

Name : Francci3_4110 (Francci3_4110)
Accession : YP_483187.1
Strain : Frankia sp. CcI3
Genome accession: NC_007777
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3316
EC number : -
Position : 4915559 - 4916269 bp
Length : 711 bp
Strand : -
Note : -

DNA sequence :
ATGCGTCGACGTCGTGCCTGTCCACCGGTTCCGGTGTCGGAGTTCGCGGGGTTCCGGTTCCCACCTGAGGTGATTGTCCT
CGCTGTCCGCTGGTACCTGCGGTACGTACTGTCCTACCGGGACGTCGAGGAGCTGCTCGCTGAACGCGGCCTCGAGGTCG
ACCACGTCACGGTCTATCGGTGGGTGCAGCGCTTCACGCCCTTGCTGGTGGAGGCGGCCCGGCCGTGCCGGCACCGTCCT
GGCGGAAGGTGGTTCGTCGACGAGACCTACGTCAAGGTCTCCGGCCGCTGGACCTACGTGTACCGGGCGGTCGACCAATA
CGGGCAGGTCATCGACGTCCTCGCCAGCACACGGCGCGACCAGGCAACCGCCCGGCGATTCTTCGTTCGAGCGCTGACGT
ATGGGCGCCGCCCGGACGAGGTCACCACCGACAAGGCCGCGGTCTACCCGCGGGTCCTCGACGAGCTGGTACCCGAGGCC
TGCCACATCGACGCCGCCCGGGAGAACAACCGGATCGAAGCCGACCACGGCCGGTTGACAGCACGGCTCCGACCGATGCG
CGGACTGAAACGACTGCGGTCCGTCCAGACGATCAGCGCCGGCCACGCGCTGGTCCAGAACATCCGCCGCGGCCACTACG
AACTCGGGATCGACACCAGGCCGCAGATACGGCTGGCAGCCGCGTTCACCGAACTCGCCGCCGCTGTCTGA

Protein sequence :
MRRRRACPPVPVSEFAGFRFPPEVIVLAVRWYLRYVLSYRDVEELLAERGLEVDHVTVYRWVQRFTPLLVEAARPCRHRP
GGRWFVDETYVKVSGRWTYVYRAVDQYGQVIDVLASTRRDQATARRFFVRALTYGRRPDEVTTDKAAVYPRVLDELVPEA
CHIDAARENNRIEADHGRLTARLRPMRGLKRLRSVQTISAGHALVQNIRRGHYELGIDTRPQIRLAAAFTELAAAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA6100 ACN81001.1 transposase Not tested AbaR5 Protein 1e-31 41
tnpA6100 ACN62081.1 TnpA6100 Not tested SGI1 Protein 9e-32 41
tnp6100 ACX47960.1 tnp6100 Not tested SGI1 Protein 9e-33 41
tnpA6100 AGK07018.1 IS6100 transposase Not tested SGI1 Protein 9e-33 41
tnpA6100 AGK07076.1 IS6100 transposase Not tested SGI1 Protein 9e-33 41