|
Name : Francci3_4107 (Francci3_4107) Accession : YP_483184.1 Strain : Frankia sp. CcI3 Genome accession: NC_007777 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3316 EC number : - Position : 4914028 - 4914738 bp Length : 711 bp Strand : + Note : - DNA sequence : ATGCGTCGGCGTCGTGCCTGTCCACCGGTCCCAGTGTCGGAGTTCGCCGGCTTCCGGTTCCCACCCGAGGTGATCGTCCT CGCCGTCCGCTGGTATCTGCGGTACGCGCTGTCCTACCGGGATGTCGAGGAGCTCCTCGCGGAACGCGGCCTCGAGGTTG ATCACGTCACGGTGTACCGGTGGGTGCGGCGCTTCACGCCCCTGCTGGTCGACGCGGCCCGGCCGTGCCGGCACCGGCCC GGTGACAGGTGGTTCGTGGATGAAACCTACGTCAAGGTCTCCGGCCGGTGGACGTACGTGTACCGGGCTGTTGACCAGCA CGGGCAGGTCATCGACGTCCTGGCCAGCACCCACCGCGACCAGGCCGCCGCCCGACGCTTCTTCGCCCGGGCGCTGACGC ACGGGCGCCGCCCGGTCGAGGTCACTACGGACAAGGCCGCGGTCTACCCGCGGGTCCTCGACGAGCTACTCCCTGGGGCC TGTCATGTCGACGCCGCCCGGGAGAACAACCGGATCGAAACCGACCACGGCCGGTTGAAAGCACGGATCCGGCCGATGCG CGGACTGAAACGCCTCCGCTCCGTCCAGACCGTCAGCGCCGGACACGCCTTGGTCCAGAACATCCGCCGCGGCCACTACG AACTCGGAATCGACAGCAGCCCGCACCTGAGGTTGGCAGCCGCGTTCACCGAACTCGCCGCAGCCCTCTGA Protein sequence : MRRRRACPPVPVSEFAGFRFPPEVIVLAVRWYLRYALSYRDVEELLAERGLEVDHVTVYRWVRRFTPLLVDAARPCRHRP GDRWFVDETYVKVSGRWTYVYRAVDQHGQVIDVLASTHRDQAAARRFFARALTHGRRPVEVTTDKAAVYPRVLDELLPGA CHVDAARENNRIETDHGRLKARIRPMRGLKRLRSVQTVSAGHALVQNIRRGHYELGIDSSPHLRLAAAFTELAAAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA6100 | ACN81001.1 | transposase | Not tested | AbaR5 | Protein | 2e-29 | 42 |
| tnpA6100 | ACN62081.1 | TnpA6100 | Not tested | SGI1 | Protein | 1e-29 | 42 |
| tnp6100 | ACX47960.1 | tnp6100 | Not tested | SGI1 | Protein | 1e-30 | 42 |
| tnpA6100 | AGK07018.1 | IS6100 transposase | Not tested | SGI1 | Protein | 1e-30 | 42 |
| tnpA6100 | AGK07076.1 | IS6100 transposase | Not tested | SGI1 | Protein | 1e-30 | 42 |
| tnp6100 | ACS32049.1 | Tnp6100 | Not tested | SGI2 | Protein | 9e-30 | 41 |
| tnpA6100 | AGF34993.1 | IS6100 transposase | Not tested | SGI1 | Protein | 9e-30 | 41 |
| tnpA6100 | AGF35032.1 | IS6100 transposase | Not tested | SGI1 | Protein | 9e-30 | 41 |
| tnpA6100 | AGF35067.1 | IS6100 transposase | Not tested | SGI1 | Protein | 9e-30 | 41 |
| tnpA6100 | AGK06937.1 | IS6100 transposase | Not tested | SGI1 | Protein | 9e-30 | 41 |
| tnpA6100 | AGK06983.1 | IS6100 transposase | Not tested | SGI1 | Protein | 9e-30 | 41 |
| CDBH8_0916 | YP_005160008.1 | transposase-like protein | Not tested | Not named | Protein | 1e-29 | 41 |
| tnpA6100 | AGK07042.1 | IS6100 transposase | Not tested | SGI1 | Protein | 9e-30 | 41 |
| tnpA6100 | AGK07113.1 | IS6100 transposase | Not tested | SGI1 | Protein | 9e-30 | 41 |
| tnpA | AAG03007.1 | transposase | Not tested | SGI1 | Protein | 9e-30 | 41 |
| tnpA | CAJ77056.1 | Transposase | Not tested | AbaR1 | Protein | 9e-30 | 41 |
