Gene Information

Name : Francci3_4083 (Francci3_4083)
Accession : YP_483160.1
Strain : Frankia sp. CcI3
Genome accession: NC_007777
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3316
EC number : -
Position : 4892150 - 4892860 bp
Length : 711 bp
Strand : -
Note : -

DNA sequence :
ATGCGTCGACGTCGTGCCTGTCCACCGGTCCCGACATCGGAGTTCGCCGGGTTCCGGTTCCCACCCGAGGTGATCATCCT
GGCAGTCCGCTGGTACCTGCGGTACGCCTTGTCGTACCGTGACGTCGAGGAACTCCTCGCCGAACGCGGCATCGACGTTG
ACCACGTCACGGTCTACCGGTGGGTGCGCCGGTTCACCCCGCTGCTTATCGACGCGGCCCGGCCATGCCGGCACACACCG
GGTGATCGTTGGTTCGTCGACGAAACGTATGTGAAGGTCGCTGGACGATGGACCTATCTGTACCGGGCCGTCGACCAGTC
CGGCCAGGTCATCGACGTGCTGGCCTCCGAGAAGCGGGACCTCGCCGCGGCCCGCCGGTTCTTCACCCGCGCCCTGTCCC
ACGGCCGGCGGCCCGTCGAGGTGACCACCGACCGGGCAGCCTTCTACCCACGAGTCCTCGACGAACAGCTCCCCGCCGCT
CATCACGTCGACGACCAGTACGCGAACAATCCGATCGAAGCCGACCACGGCCGGTTCACGGCACGACTACGGCCGATGCG
CGGCCTGAAACGCCTCCGCTCCGCACAGACCATCGGCTCCGGGCACACGTTCGTGCAGAACATCCGCCGCGGCCACTACG
AACTGGGCGTCGATGCCGACCTCCGGAACCGGCTGACGGCTGCCTTCACCGAACTCACCCTGGCCATCTGA

Protein sequence :
MRRRRACPPVPTSEFAGFRFPPEVIILAVRWYLRYALSYRDVEELLAERGIDVDHVTVYRWVRRFTPLLIDAARPCRHTP
GDRWFVDETYVKVAGRWTYLYRAVDQSGQVIDVLASEKRDLAAARRFFTRALSHGRRPVEVTTDRAAFYPRVLDEQLPAA
HHVDDQYANNPIEADHGRFTARLRPMRGLKRLRSAQTIGSGHTFVQNIRRGHYELGVDADLRNRLTAAFTELTLAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA6100 ACN62081.1 TnpA6100 Not tested SGI1 Protein 3e-27 42
tnpA6100 ACN81001.1 transposase Not tested AbaR5 Protein 4e-27 42
tnpA6100 AGF34993.1 IS6100 transposase Not tested SGI1 Protein 3e-27 42
tnp6100 ACX47960.1 tnp6100 Not tested SGI1 Protein 4e-28 42
tnpA6100 AGF35032.1 IS6100 transposase Not tested SGI1 Protein 3e-27 42
tnpA6100 AGK07018.1 IS6100 transposase Not tested SGI1 Protein 4e-28 42
tnpA6100 AGF35067.1 IS6100 transposase Not tested SGI1 Protein 3e-27 42
tnpA6100 AGK07076.1 IS6100 transposase Not tested SGI1 Protein 4e-28 42
tnpA6100 AGK06937.1 IS6100 transposase Not tested SGI1 Protein 3e-27 42
tnpA6100 AGK06983.1 IS6100 transposase Not tested SGI1 Protein 3e-27 42
CDBH8_0916 YP_005160008.1 transposase-like protein Not tested Not named Protein 4e-27 42
tnpA6100 AGK07042.1 IS6100 transposase Not tested SGI1 Protein 3e-27 42
tnpA6100 AGK07113.1 IS6100 transposase Not tested SGI1 Protein 3e-27 42
tnpA AAG03007.1 transposase Not tested SGI1 Protein 3e-27 42
tnp6100 ACS32049.1 Tnp6100 Not tested SGI2 Protein 3e-27 42
tnpA CAJ77056.1 Transposase Not tested AbaR1 Protein 3e-27 42