Gene Information

Name : Francci3_0374 (Francci3_0374)
Accession : YP_479490.1
Strain : Frankia sp. CcI3
Genome accession: NC_007777
Putative virulence/resistance : Resistance
Product : cystathionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 4.4.1.1
Position : 439874 - 441052 bp
Length : 1179 bp
Strand : -
Note : -

DNA sequence :
ATGCATATGGAGCAGCCCGCTGAGGGATTCGAGACCATCGCGATCCATGCCGGCCAGGAGCCCGATCCCGTCACGGGAGC
GGTGGTGACGCCGATCCACCAGTCCTCGACGTTCGCCCAGGATGGCGTGGGTGGGCTTCGGAGCGGTTACGAGTACAGTC
GTTCGGCGAATCCGACCCGTACCGCGCTGGAGACCTGCCTCGCCGCACTGGAACGCGGGACGGTCGGCCTCGCTTTCTCC
TCCGGCATGGCGGCGGCGGACGCCCTGCTGCGAACCGTCTGCCGGCCCGGAGACCACGTCATCATCCCGGCGGACGCCTA
TGGCGGCACCTACCGGCTCATCGCCCGGGTGCTCGCCGACTGGGGCGTCGACCACACCAGCATCGATCTCACCGACCTCG
ATGCGGTGCGAGTCGCGATCCGTCCGGGCACCACGCGACTGGTGTGGTGCGAAACCCCGACCAATCCCATGCTGTCCATC
GCCGACATCGTCGCTCTCTCGTCGCTGGCGCATGACGCGGGGGCGCTGCTGACGGTCGACAACACGTTCGCTTCGCCCTA
CCTGCAGCAGCCACTGACCCTGGGGGCGGACGCGGTGGTGCATTCCACGACGAAGTATCTCGGTGGCCACAGCGATGTCG
TCGGCGGCGCGCTCGTGGTCGGCGATCCGGACCTGGGCGCCCGGCTACGGTTCCTGCAGAACGCGGCCGGCGCCGTCGCC
GGCCCCTTCGACAGCTGGCTGGTACTGCGCGGTGTCAAGACGCTCCCCGTTCGGATGGACCGGCACTGCGACAACGCTCG
GCGTATCGCGGCCGAGCTCGCCACGCACCCCGCTGTCGGGGCCGTCCGCTACCCGGGTTCGACCGGCCATGCGGGTCACG
ACATCGCCGCGAAGCAAATGCGCGACTTCGGGGGAATGGTCTCGTTCACCCTTCGGGCCGGCCCCCAGGCGGCCGTGGCG
GCATGTGGCCGGACCAGGCTGTTCACTCTCGCCGAGTCGTTGGGTGGGGTGGAATCCCTGATCGAACATCCGGCGAGCAT
GACCCATGCCTCGGTGGAGGGCTCGCCGCTCGCGGTACCCGCGGACCTCGTTCGGCTCTCGGTCGGGATCGAATCAGTGG
ACGACCTCGTCGCCGATCTGCACCAGGCGCTGCGCGGGCTTTCCGACGGATCCGCGTAG

Protein sequence :
MHMEQPAEGFETIAIHAGQEPDPVTGAVVTPIHQSSTFAQDGVGGLRSGYEYSRSANPTRTALETCLAALERGTVGLAFS
SGMAAADALLRTVCRPGDHVIIPADAYGGTYRLIARVLADWGVDHTSIDLTDLDAVRVAIRPGTTRLVWCETPTNPMLSI
ADIVALSSLAHDAGALLTVDNTFASPYLQQPLTLGADAVVHSTTKYLGGHSDVVGGALVVGDPDLGARLRFLQNAAGAVA
GPFDSWLVLRGVKTLPVRMDRHCDNARRIAAELATHPAVGAVRYPGSTGHAGHDIAAKQMRDFGGMVSFTLRAGPQAAVA
ACGRTRLFTLAESLGGVESLIEHPASMTHASVEGSPLAVPADLVRLSVGIESVDDLVADLHQALRGLSDGSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-75 47
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 9e-77 47
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-63 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Francci3_0374 YP_479490.1 cystathionine gamma-lyase BAC0207 Protein 2e-68 44