Gene Information

Name : Francci3_2944 (Francci3_2944)
Accession : YP_482031.1
Strain : Frankia sp. CcI3
Genome accession: NC_007777
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 3477679 - 3479199 bp
Length : 1521 bp
Strand : +
Note : -

DNA sequence :
ATGACGTACGTCCCACCTGGAAAGCCAGGCAGTATCGTCCATGTTACGGACCGGTACGAGAACTTCATCGGTGGAAAGTG
GCTGCCGCCGCGGGCCGGTAAGTATTCGACCAACCTCAGCCCGGCCACGGCGCAGCCGATCTGTGAAATACCGCGGTCGG
CGGCGGAGGATGTCGAGGACGCCCTGGACGCGGCGCACGCCGCCGCCGGCTCCTGGGCCGCCGCGTCCCCGGCGGAGCGG
GCCGAGGTGCTGACCGCGGTGGCGGATGCGATCGACGCCAACCGGGAGATGCTCGCGGTCACGGAGAGCTGGGAGAACGG
CAAGCCGGTGCGGGAGACGCTGGCTGCCGACATCCCGCTGGCCGCCGACCACTTCCGGTACTTCGCCGCGGCGGCGCGCA
CCCTGGAGGGGTCGATCTCCGAGATTGACGGCAGGACCTACGCCTATCACTTCCACGAGCCGCTCGGGGTGGTCGGGCAG
ATCATCCCCTTCAACTTCCCGTTGCTGATGGCGGCGTGGAAGCTGGCGCCCGCGCTGGCCGCGGGTAACTGCTCGGTGAT
CAAGCCGGCGTCACCGACGCCGTGGTCGATCCTCAAGCTCGCCGAGGTGATTCAGGACGTCATCCCGCCCGGCATCATCA
ACATCGTCAACGGGCCCGGCGCCGAGGTCGGCAGAGCCCTGGCCACCAGCCCGAAGATCGCGAAGATCGGGTTCACCGGT
GAGACCACGACCGGCCGGCTGATGATGCAGTACGCGGCGCGGAACATCATCCCGGTCACCCTGGAGCTGGGCGGAAAGTC
CCCGAACATCTTCTTCGAGGACGTCCTGGCCGCCGACGACGCCTATCTGAACAAGGCGGTCGAGGGGCTGGTGCTGTATG
CGTTCAACAAGGGCGAGGTGTGCACCTGCCCGTCCCGGGCGCTGATCCAGGAGTCGATCTACGACGAGTTCATGGCGCGG
GCGCTGGAACGGGTCGGCCGGATCCAGCAGGGCAACCCGTTGGACCCGGCGACAATGCTGGGCCCGCAGGTCTCCGCGCA
GCAGCTGTCAAAGATCGGCTCCTACGTGGACATCGGCCTGGCTGAGGGCGCCGAACTGCTGGCCGGTGGGCACCGGACGC
GGCTGGCCGGAGAGTTCGCGAACGGCTACTTCTTCGAGCCGACGCTGCTGAAGGGCCACAACAAGATGCGGGTCTTCCAG
GAGGAAATCTTCGGCCCGGTGCTGGCTGTCACCACCTTCAAGGACGAGGCCGAGGCGTTGGCCATCGCCAACGACACGCC
TTACGGGCTCGGTGCCGGTGTGTGGACGCGGGACGGTGCCCGCCAGTTCCGGATGGGCCGGGGCATCAAGGCCGGCCGGG
TCTGGGTCAACTGCTACCACCAGTATCCGGCGGGCGCGGCATTCGGCGGATACAAGGTGTCCGGCATCGGCCGCGAAAAC
CACCGGATGATGCTGGAGCACTACAGCCAGACCAAGAACATGCTGGTCAGCTACGACGAGAACGCGCTCGGCCTGTTCTA
G

Protein sequence :
MTYVPPGKPGSIVHVTDRYENFIGGKWLPPRAGKYSTNLSPATAQPICEIPRSAAEDVEDALDAAHAAAGSWAAASPAER
AEVLTAVADAIDANREMLAVTESWENGKPVRETLAADIPLAADHFRYFAAAARTLEGSISEIDGRTYAYHFHEPLGVVGQ
IIPFNFPLLMAAWKLAPALAAGNCSVIKPASPTPWSILKLAEVIQDVIPPGIINIVNGPGAEVGRALATSPKIAKIGFTG
ETTTGRLMMQYAARNIIPVTLELGGKSPNIFFEDVLAADDAYLNKAVEGLVLYAFNKGEVCTCPSRALIQESIYDEFMAR
ALERVGRIQQGNPLDPATMLGPQVSAQQLSKIGSYVDIGLAEGAELLAGGHRTRLAGEFANGYFFEPTLLKGHNKMRVFQ
EEIFGPVLAVTTFKDEAEALAIANDTPYGLGAGVWTRDGARQFRMGRGIKAGRVWVNCYHQYPAGAAFGGYKVSGIGREN
HRMMLEHYSQTKNMLVSYDENALGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-102 60
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-110 59
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-110 59
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-110 59
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-109 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Francci3_2944 YP_482031.1 aldehyde dehydrogenase VFG0082 Protein 3e-102 60