Gene Information

Name : Francci3_2447 (Francci3_2447)
Accession : YP_481543.1
Strain : Frankia sp. CcI3
Genome accession: NC_007777
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2843123 - 2843806 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGTATACCCTTACCGGCGTTTCCAAGACCTTCCGCGCCCGTGGCAGCACCGTCACCGCGGTGCGGGACCTGAACCTGTC
CATCGCCGACGGCGAATGGCTCGCCATCCAGGGCCGCACCGGCAGCGGCAAGAGCACCCTGCTGCAGCTGTTGGGCGGCA
TGGACCGGCCCAGCACCGGCACCGTCAACCTCGACGGTCAGGACCTGGCCACGATGTCCGAGAAACAGCTCACCGAGATC
CGTGCCGCCCGGGTCGGCTTCGTGTTCCAGATGTTCAACCTCATCCCCACCCTGTCCGCGATCGAGAACGTCGAAGCCGC
CCTCGTTCCGCTGCGCACCCCCGCCGTCCAGCGCCGGGAACGCGCGGCGGCAGCGCTGGCGGCCGTGGGCCTGGCCGATC
GAGCCGGACACCTGCCCTCCGAGCTGTCCGGCGGCCAGCAACAACGCGTGGGGATCGCCCGGGCCCTGGTCAAGGAACCC
AGCGTGCTGCTCGCCGACGAGCCCACCGGCAACCTCGACGTCGACACCCGCGACGAGATCCTCACGCTGCTCGAACAGAT
CTGGACCGCCAACCAGCTCACGCTCGTGCTCGTCACCCACGACAGCGCCGTCGCGGCCCTCGCCGAACGTGTTGCCGTCA
TGCACGACGGCAAGCTGGACATCACCGGTACGCGGATCGGGTGA

Protein sequence : 
MYTLTGVSKTFRARGSTVTAVRDLNLSIADGEWLAIQGRTGSGKSTLLQLLGGMDRPSTGTVNLDGQDLATMSEKQLTEI
RAARVGFVFQMFNLIPTLSAIENVEAALVPLRTPAVQRRERAAAALAAVGLADRAGHLPSELSGGQQQRVGIARALVKEP
SVLLADEPTGNLDVDTRDEILTLLEQIWTANQLTLVLVTHDSAVAALAERVAVMHDGKLDITGTRIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Francci3_2447 YP_481543.1 ABC transporter NC_008702.1.4606598. Protein 2e-32 48
Francci3_2447 YP_481543.1 ABC transporter NC_012469.1.7685735. Protein 5e-33 44
Francci3_2447 YP_481543.1 ABC transporter NC_012469.1.7686878. Protein 2e-39 43
Francci3_2447 YP_481543.1 ABC transporter CP001581.1.gene798.p Protein 1e-35 42