Gene Information

Name : Francci3_2416 (Francci3_2416)
Accession : YP_481512.1
Strain : Frankia sp. CcI3
Genome accession: NC_007777
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 2805957 - 2807474 bp
Length : 1518 bp
Strand : -
Note : -

DNA sequence :
GTGAATGCCGTGAGCACGGTGAGCACGAAGGCGGACGCCGTGGCGGGCCGGAACATCGTGGAGCTCACCGGGCTGTCCGT
CGCGGGCACCGGCGTGACCGGCGCGTCCGAGCGGGTGCTGCGGACGATCCGCGGCACGGTGATCGGACTGGTCCCGCAGG
ACCCGATGGTCGGGCTCAACCCGACGATGCGGATCGGCGGGCAGCCGGCCGAGGCCGTGCGCCGCAGCGGCGTTGACAAG
CGGCTCGTCTCCGCCGAGGTGGTCGAGGCGCTCGACCGGGCCGGGCTCGACAACCCGGTCCTGCGGGCCCGGCAGTACCC
GAACCAGCTCTCCGGCGGCATGCGGCAACGGGTCCTCATCGCGATCGCGATCGCCGCGCATCCGCGCCTCATCGTCGCCG
ACGAACCGACGAGCGCGCTCGACGTCACCGTGCAGCGGCGGATCCCCGACCATCTCGGCCGCCTGGTTGCCGAGTCCGGC
ACCTCGCTGCTCATCATCACCCACGACCTCGGGGTCGCGGCCGACCAGGCCGACCGGGTCGTCGTGATGCGGCGCGGCCG
GGTCGTCGAACGCGGGGCACCGGCGTCGATCCTGCGCACCCCGCGCGACCCTTACACCCGCCACCTCATCGAGGTGGCGC
CGGCGTTGTCGTCCACCGGCGGCCTCGTCCCGCGCTTCCCCGAGGCGCCCCCGGCTCCCGAGCTGCTGCGGCTAGAGGGG
ATCACGAAGGACTTCCGGCTGCCCCGGACCCGGGGCGGGGAGCGGGTCTTCCGGGCGCTGGACGAGGTGTCCCTGTCGGT
GCGGGCGGGCCAGACCCTGGGCCTCCTCGGCGAGTCCGGGTCGGGCAAGACCACCGCGCCGCGCATCGCGATGGGCCTGG
AGAAGCCGACCAGCGGCCGGATCCACCTCGACGGGCAGGACATCACCTCCGCCGGCTGGTCGCAGCTGCGGCCGCTGCGG
CGGCGGTTCCAGCTTGTCCACCAGAACCCGTTCTCCTCACTGGACCCGCGGTTCACCGTCGGGGAGAGCATCGCCGAGCC
GCTGCTCTCCTTCCGCGTCGGCGACCGGGCCAGCCGCGCCGCCCGGGTGCGCGAGCTGCTCGATCAGGTCGCCCTGCCCG
CCGCGTTCCGCGGCCGCCGGCCGATCGAGCTCTCCGGCGGCCAGCGCCAGCGGGTCGCGATCGCCCGGGCACTCGCGATC
GAACCCGAGCTGGTCTTCCTCGACGAACCCGTCTCGGCGCTCGACGTGTCGGTGCAGGACCAGATCCTGACCCTGCTCCT
GCGGCTGCAGCAGGAGCTCGGGGTCGCCTACTTCTTCATTTCCCACGATCTCGCCGTCGTGGCCCAGCTCGCCCACGAGG
TCGCGGTGCTGCGCGCCGGCCGCATCGTCGAGAGTGCTCCGGCGGCCGACGTCCTCACCGCGCCGACGCAGGACCACACC
CGCGAGCTGCTCGGCGCGATTCCCGGGCAACGGTTCGCGGCCGCACTCGCCGCCGCCCAAGGAAAGGACGCACGATGA

Protein sequence :
MNAVSTVSTKADAVAGRNIVELTGLSVAGTGVTGASERVLRTIRGTVIGLVPQDPMVGLNPTMRIGGQPAEAVRRSGVDK
RLVSAEVVEALDRAGLDNPVLRARQYPNQLSGGMRQRVLIAIAIAAHPRLIVADEPTSALDVTVQRRIPDHLGRLVAESG
TSLLIITHDLGVAADQADRVVVMRRGRVVERGAPASILRTPRDPYTRHLIEVAPALSSTGGLVPRFPEAPPAPELLRLEG
ITKDFRLPRTRGGERVFRALDEVSLSVRAGQTLGLLGESGSGKTTAPRIAMGLEKPTSGRIHLDGQDITSAGWSQLRPLR
RRFQLVHQNPFSSLDPRFTVGESIAEPLLSFRVGDRASRAARVRELLDQVALPAAFRGRRPIELSGGQRQRVAIARALAI
EPELVFLDEPVSALDVSVQDQILTLLLRLQQELGVAYFFISHDLAVVAQLAHEVAVLRAGRIVESAPAADVLTAPTQDHT
RELLGAIPGQRFAAALAAAQGKDAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 4e-88 49
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-57 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-57 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-57 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-57 42