Gene Information

Name : Francci3_0199 (Francci3_0199)
Accession : YP_479318.1
Strain : Frankia sp. CcI3
Genome accession: NC_007777
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 237273 - 238148 bp
Length : 876 bp
Strand : -
Note : -

DNA sequence : 
GTGGCTGAGGTGGTCGGGACAACGGAAAACGAACTGGCCTGGACGCCGGAGGAACCGGCAGGACAAGAGCAGACAGGACA
AGAGCAGGCAGGGCAAGAGCAGGCAGGGCAAGAGCAGGCAAGGTCGGGAGGGACGGCGGGTCCGGCGACGCCGCTCCCGC
CGTATTCGGACAACGACACCCTCGTCGTCAACGCCCCTGTCATCGAGCTGGACCAGGTGACCAAGTCCTACCGGGCGGGA
TCGCTGGACGTCACGGCGCTGCGTGGTGTCTCGGCCCGGATCGGAACCGGCGAGTACGTCGCGATCGTCGGGCCGTCCGG
GTCCGGGAAGTCGACGCTGATGCACATCATCGGCTGCCTCGACGTGCTCACCTCGGGCAGCTACCGGCTCTCTGGGGAGG
ACGTCGGCGGGATGAGCGAGGCCGACCTGGCCGAGATCCGCAACCGCCGGATCGGCTTCGTGTTCCAGCAGTTCAACCTG
TTGCCGTCGCTGTCCGCGTGGCGCAACGTCGAGCTGCCCCTGACCTACCGGGGGATGCGCCGCGAGGTCCGCCGGGCGCG
GGCCGTCGCGGCACTCGACCGGGTCGGCCTCGCCGACCGGGTTGAGCACCGGCCGGGCGAGCTGTCCGGCGGCCAGCAGC
AACGCGTCGCGATGGCCCGGGCGCTGGTCGGCGACCCGTCGCTCATCCTGGCCGACGAGCCGACCGGAAACCTGGACTCC
ACCGCCACCGGTGACGTGCTGGACCTCCTCGACGAGCTGCACCAGCAGGGCCGGACGATCGTCCTGATCACTCATGAGCT
GGACGTGGCGGCCCGGGCGCACCGGGTCGTGCGGATCCGGGACGGCCTGGTCGAGTCCGACACGGCGGCATCCTGA

Protein sequence : 
MAEVVGTTENELAWTPEEPAGQEQTGQEQAGQEQAGQEQARSGGTAGPATPLPPYSDNDTLVVNAPVIELDQVTKSYRAG
SLDVTALRGVSARIGTGEYVAIVGPSGSGKSTLMHIIGCLDVLTSGSYRLSGEDVGGMSEADLAEIRNRRIGFVFQQFNL
LPSLSAWRNVELPLTYRGMRREVRRARAVAALDRVGLADRVEHRPGELSGGQQQRVAMARALVGDPSLILADEPTGNLDS
TATGDVLDLLDELHQQGRTIVLITHELDVAARAHRVVRIRDGLVESDTAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-26 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-26 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Francci3_0199 YP_479318.1 ABC transporter NC_012469.1.7686878. Protein 1e-48 53